Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.24□□□□□ -1.89
Pcdh1F7BJK1 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.24□□□□□ -1.89
Pcdh1F7BJK1 Gm42774-201ENSMUST00000198854 283 ntBASIC3.24□□□□□ -1.89
Pcdh1F7BJK1 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.24□□□□□ -1.89
Pcdh1F7BJK1 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.24□□□□□ -1.89
Pcdh1F7BJK1 Gm10360-201ENSMUST00000097219 272 ntBASIC3.24□□□□□ -1.89
Pcdh1F7BJK1 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.24□□□□□ -1.89
Pcdh1F7BJK1 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Pcdh1F7BJK1 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Pcdh1F7BJK1 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.24□□□□□ -1.89
Pcdh1F7BJK1 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 Gm25765-201ENSMUST00000104100 132 ntBASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 Gm23013-201ENSMUST00000104146 106 ntBASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 Gm14073-201ENSMUST00000117344 381 ntBASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 Gm14020-201ENSMUST00000118165 662 ntBASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 Gm11982-201ENSMUST00000121480 314 ntBASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 Gm25107-201ENSMUST00000122472 129 ntBASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 Gm22204-201ENSMUST00000122654 327 ntBASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 Gm25999-201ENSMUST00000175398 133 ntBASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 Gm25198-201ENSMUST00000178574 110 ntBASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 Mir6371-201ENSMUST00000184470 111 ntBASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 Gm19901-201ENSMUST00000192191 495 ntBASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 Mir1a-2-201ENSMUST00000198520 72 ntBASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 Gm45687-201ENSMUST00000209454 155 ntBASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 Gm18015-201ENSMUST00000214879 316 ntBASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 AC098718.2-201ENSMUST00000226822 285 ntBASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 Gm25813-201ENSMUST00000082748 191 ntBASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 Mir384-201ENSMUST00000083565 88 ntBASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 Gm26165-201ENSMUST00000083791 138 ntBASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 Snord15a-201ENSMUST00000083888 148 ntBASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 Gm26327-201ENSMUST00000093724 111 ntBASIC3.23□□□□□ -1.89
Pcdh1F7BJK1 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Pcdh1F7BJK1 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.22□□□□□ -1.89
Pcdh1F7BJK1 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.22□□□□□ -1.89
Pcdh1F7BJK1 Mir1193-201ENSMUST00000116761 121 ntBASIC3.22□□□□□ -1.89
Pcdh1F7BJK1 Gm14518-201ENSMUST00000117351 542 ntBASIC3.22□□□□□ -1.89
Pcdh1F7BJK1 Gm22560-201ENSMUST00000157332 120 ntBASIC3.22□□□□□ -1.89
Pcdh1F7BJK1 Gm22889-201ENSMUST00000158639 58 ntBASIC3.22□□□□□ -1.89
Pcdh1F7BJK1 Gm20399-201ENSMUST00000174652 132 ntBASIC3.22□□□□□ -1.89
Pcdh1F7BJK1 Gm27271-201ENSMUST00000183509 170 ntBASIC3.22□□□□□ -1.89
Pcdh1F7BJK1 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.22□□□□□ -1.89
Pcdh1F7BJK1 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.22□□□□□ -1.89
Pcdh1F7BJK1 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC3.22□□□□□ -1.89
Pcdh1F7BJK1 Gm18000-201ENSMUST00000212153 800 ntBASIC3.22□□□□□ -1.89
Pcdh1F7BJK1 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Pcdh1F7BJK1 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.89
Pcdh1F7BJK1 Gm37061-201ENSMUST00000195066 3243 ntBASIC3.21□□□□□ -1.89
Pcdh1F7BJK1 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.89
Pcdh1F7BJK1 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.21□□□□□ -1.89
Pcdh1F7BJK1 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.21□□□□□ -1.9
Pcdh1F7BJK1 Gm13567-201ENSMUST00000118026 247 ntBASIC3.21□□□□□ -1.9
Pcdh1F7BJK1 Gm15183-201ENSMUST00000118933 348 ntBASIC3.21□□□□□ -1.9
Pcdh1F7BJK1 Gm24745-201ENSMUST00000157840 85 ntBASIC3.21□□□□□ -1.9
Pcdh1F7BJK1 Gm24131-201ENSMUST00000158539 107 ntBASIC3.21□□□□□ -1.9
Pcdh1F7BJK1 Gm23365-201ENSMUST00000175019 125 ntBASIC3.21□□□□□ -1.9
Pcdh1F7BJK1 Gm25960-201ENSMUST00000175110 125 ntBASIC3.21□□□□□ -1.9
Pcdh1F7BJK1 Gm44453-201ENSMUST00000175161 126 ntBASIC3.21□□□□□ -1.9
Pcdh1F7BJK1 Gm22120-201ENSMUST00000175590 70 ntBASIC3.21□□□□□ -1.9
Pcdh1F7BJK1 Gm25195-201ENSMUST00000177656 126 ntBASIC3.21□□□□□ -1.9
Pcdh1F7BJK1 Gm25935-201ENSMUST00000178746 107 ntBASIC3.21□□□□□ -1.9
Pcdh1F7BJK1 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.21□□□□□ -1.9
Pcdh1F7BJK1 Gm44922-201ENSMUST00000206690 90 ntBASIC3.21□□□□□ -1.9
Pcdh1F7BJK1 AC154282.1-201ENSMUST00000223154 265 ntBASIC3.21□□□□□ -1.9
Pcdh1F7BJK1 Gm9174-201ENSMUST00000078149 255 ntBASIC3.21□□□□□ -1.9
Pcdh1F7BJK1 Gm10212-201ENSMUST00000087884 324 ntBASIC3.21□□□□□ -1.9
Pcdh1F7BJK1 Gm24164-201ENSMUST00000093663 104 ntBASIC3.21□□□□□ -1.9
Pcdh1F7BJK1 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Pcdh1F7BJK1 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Pcdh1F7BJK1 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.21□□□□□ -1.9
Pcdh1F7BJK1 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Pcdh1F7BJK1 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Pcdh1F7BJK1 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Pcdh1F7BJK1 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Pcdh1F7BJK1 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Pcdh1F7BJK1 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Pcdh1F7BJK1 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Pcdh1F7BJK1 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.2□□□□□ -1.9
Pcdh1F7BJK1 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
Pcdh1F7BJK1 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Pcdh1F7BJK1 Gm14215-201ENSMUST00000120578 221 ntBASIC3.2□□□□□ -1.9
Pcdh1F7BJK1 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC3.2□□□□□ -1.9
Pcdh1F7BJK1 Gm25494-201ENSMUST00000158143 100 ntBASIC3.2□□□□□ -1.9
Pcdh1F7BJK1 Gm22501-201ENSMUST00000158981 127 ntBASIC3.2□□□□□ -1.9
Pcdh1F7BJK1 Gm26219-201ENSMUST00000175216 71 ntBASIC3.2□□□□□ -1.9
Pcdh1F7BJK1 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Pcdh1F7BJK1 Mir6370-201ENSMUST00000183510 120 ntBASIC3.2□□□□□ -1.9
Pcdh1F7BJK1 Mir6914-201ENSMUST00000184999 69 ntBASIC3.2□□□□□ -1.9
Pcdh1F7BJK1 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC3.2□□□□□ -1.9
Pcdh1F7BJK1 Gm44429-201ENSMUST00000203542 186 ntBASIC3.2□□□□□ -1.9
Pcdh1F7BJK1 Gm44294-201ENSMUST00000205090 728 ntBASIC3.2□□□□□ -1.9
Pcdh1F7BJK1 AC124182.1-201ENSMUST00000227091 321 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms