Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm44657-201ENSMUST00000208568 450 ntBASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm25788-201ENSMUST00000082721 131 ntBASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC0.14□□□□□ -2.39
Col6a3E9PWQ3 Gm13541-201ENSMUST00000119519 283 ntBASIC0.14□□□□□ -2.39
Col6a3E9PWQ3 Gm12686-201ENSMUST00000120546 397 ntBASIC0.14□□□□□ -2.39
Col6a3E9PWQ3 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.14□□□□□ -2.39
Col6a3E9PWQ3 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
Col6a3E9PWQ3 Gm24837-201ENSMUST00000158683 81 ntBASIC0.14□□□□□ -2.39
Col6a3E9PWQ3 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
Col6a3E9PWQ3 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
Col6a3E9PWQ3 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.14□□□□□ -2.39
Col6a3E9PWQ3 Mir19b-1-201ENSMUST00000102301 87 ntBASIC0.14□□□□□ -2.39
Col6a3E9PWQ3 Gm14937-201ENSMUST00000119709 208 ntBASIC0.14□□□□□ -2.39
Col6a3E9PWQ3 Gm15029-201ENSMUST00000119742 199 ntBASIC0.14□□□□□ -2.39
Col6a3E9PWQ3 Gm22519-201ENSMUST00000158270 178 ntBASIC0.14□□□□□ -2.39
Col6a3E9PWQ3 Gm7346-201ENSMUST00000169661 476 ntBASIC0.14□□□□□ -2.39
Col6a3E9PWQ3 Gm27869-201ENSMUST00000184327 122 ntBASIC0.14□□□□□ -2.39
Col6a3E9PWQ3 Gm36189-201ENSMUST00000204113 523 ntBASIC0.14□□□□□ -2.39
Col6a3E9PWQ3 Snord95-201ENSMUST00000082846 68 ntBASIC0.14□□□□□ -2.39
Col6a3E9PWQ3 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC0.14□□□□□ -2.39
Col6a3E9PWQ3 Gm24218-201ENSMUST00000180163 105 ntBASIC0.14□□□□□ -2.39
Col6a3E9PWQ3 Gm16399-201ENSMUST00000181423 219 ntBASIC0.14□□□□□ -2.39
Col6a3E9PWQ3 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC0.14□□□□□ -2.39
Col6a3E9PWQ3 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC0.14□□□□□ -2.39
Col6a3E9PWQ3 AC162857.1-201ENSMUST00000226614 400 ntBASIC0.14□□□□□ -2.39
Col6a3E9PWQ3 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
Col6a3E9PWQ3 Mir672-201ENSMUST00000102331 100 ntBASIC0.13□□□□□ -2.39
Col6a3E9PWQ3 Gm24887-201ENSMUST00000104386 108 ntBASIC0.13□□□□□ -2.39
Col6a3E9PWQ3 Gm23836-201ENSMUST00000104434 129 ntBASIC0.13□□□□□ -2.39
Col6a3E9PWQ3 Gm8988-201ENSMUST00000155015 1240 ntBASIC0.13□□□□□ -2.39
Col6a3E9PWQ3 Gm24911-201ENSMUST00000157292 136 ntBASIC0.13□□□□□ -2.39
Col6a3E9PWQ3 Gm22663-201ENSMUST00000158721 102 ntBASIC0.13□□□□□ -2.39
Col6a3E9PWQ3 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
Col6a3E9PWQ3 Mir5101-201ENSMUST00000175181 83 ntBASIC0.13□□□□□ -2.39
Col6a3E9PWQ3 Gm20613-201ENSMUST00000175828 345 ntBASIC0.13□□□□□ -2.39
Col6a3E9PWQ3 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC0.13□□□□□ -2.39
Col6a3E9PWQ3 Npn2-202ENSMUST00000189275 235 ntBASIC0.13□□□□□ -2.39
Col6a3E9PWQ3 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC0.13□□□□□ -2.39
Col6a3E9PWQ3 Gm36984-201ENSMUST00000192770 235 ntBASIC0.13□□□□□ -2.39
Col6a3E9PWQ3 Gm37096-201ENSMUST00000192317 2058 ntBASIC0.13□□□□□ -2.39
Col6a3E9PWQ3 Gm11845-201ENSMUST00000117886 327 ntBASIC0.13□□□□□ -2.39
Col6a3E9PWQ3 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
Col6a3E9PWQ3 Gm22561-201ENSMUST00000157331 84 ntBASIC0.13□□□□□ -2.39
Col6a3E9PWQ3 Gm18357-201ENSMUST00000188184 580 ntBASIC0.13□□□□□ -2.39
Col6a3E9PWQ3 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.13□□□□□ -2.39
Col6a3E9PWQ3 Mir411-201ENSMUST00000083543 82 ntBASIC0.13□□□□□ -2.39
Col6a3E9PWQ3 Gm24142-201ENSMUST00000101960 107 ntBASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 Gm18551-201ENSMUST00000195594 642 ntBASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 Gm19140-201ENSMUST00000209790 421 ntBASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 AC122465.3-201ENSMUST00000221644 355 ntBASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 CT030166.1-201ENSMUST00000222654 357 ntBASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 Gm18397-201ENSMUST00000176704 587 ntBASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 Gm18645-201ENSMUST00000209593 651 ntBASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 AC115878.1-201ENSMUST00000227247 334 ntBASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 Gm4732-201ENSMUST00000118778 473 ntBASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 Gm23314-201ENSMUST00000157218 107 ntBASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 Snora81-201ENSMUST00000157310 178 ntBASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 Gm22522-201ENSMUST00000158271 151 ntBASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 Gm23933-201ENSMUST00000178405 79 ntBASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 Mir7057-201ENSMUST00000184685 58 ntBASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 Mir6376-201ENSMUST00000185149 131 ntBASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 Gm10360-201ENSMUST00000097219 272 ntBASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 Olfr1160-201ENSMUST00000099839 960 ntBASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 Gm43924-201ENSMUST00000204851 1736 ntBASIC0.12□□□□□ -2.39
Col6a3E9PWQ3 Gm23203-201ENSMUST00000104374 107 ntBASIC0.11□□□□□ -2.39
Col6a3E9PWQ3 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
Col6a3E9PWQ3 Gm24965-201ENSMUST00000157922 106 ntBASIC0.11□□□□□ -2.39
Col6a3E9PWQ3 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC0.11□□□□□ -2.39
Col6a3E9PWQ3 Gm18588-201ENSMUST00000177308 492 ntBASIC0.11□□□□□ -2.39
Col6a3E9PWQ3 Gm29397-201ENSMUST00000185205 333 ntBASIC0.11□□□□□ -2.39
Col6a3E9PWQ3 Gm29184-201ENSMUST00000190038 334 ntBASIC0.11□□□□□ -2.39
Col6a3E9PWQ3 AC154636.3-201ENSMUST00000221489 1214 ntBASIC0.11□□□□□ -2.39
Col6a3E9PWQ3 AC134254.5-201ENSMUST00000223436 400 ntBASIC0.11□□□□□ -2.39
Col6a3E9PWQ3 CT025602.1-201ENSMUST00000227281 382 ntBASIC0.11□□□□□ -2.39
Col6a3E9PWQ3 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.11□□□□□ -2.39
Col6a3E9PWQ3 Gm24951-201ENSMUST00000102182 109 ntBASIC0.11□□□□□ -2.39
Col6a3E9PWQ3 Gm26338-201ENSMUST00000102372 110 ntBASIC0.11□□□□□ -2.39
Col6a3E9PWQ3 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.11□□□□□ -2.39
Col6a3E9PWQ3 Mup-ps21-201ENSMUST00000119998 448 ntBASIC0.11□□□□□ -2.39
Col6a3E9PWQ3 Gm13356-201ENSMUST00000121678 335 ntBASIC0.11□□□□□ -2.39
Col6a3E9PWQ3 Gm26213-201ENSMUST00000158582 110 ntBASIC0.11□□□□□ -2.39
Col6a3E9PWQ3 Mir3066-201ENSMUST00000175296 83 ntBASIC0.11□□□□□ -2.39
Col6a3E9PWQ3 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
Col6a3E9PWQ3 Mir6364-201ENSMUST00000183396 86 ntBASIC0.11□□□□□ -2.39
Col6a3E9PWQ3 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC0.11□□□□□ -2.39
Col6a3E9PWQ3 Gm20811-201ENSMUST00000190500 553 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms