Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Gm4732-201ENSMUST00000118778 473 ntBASIC0.45□□□□□ -2.34
Trav12-1A0N8R1 Gm14972-201ENSMUST00000121780 364 ntBASIC0.45□□□□□ -2.34
Trav12-1A0N8R1 Gm12045-201ENSMUST00000122122 573 ntBASIC0.45□□□□□ -2.34
Trav12-1A0N8R1 Gm23656-201ENSMUST00000122626 112 ntBASIC0.45□□□□□ -2.34
Trav12-1A0N8R1 Gm25914-201ENSMUST00000157618 153 ntBASIC0.45□□□□□ -2.34
Trav12-1A0N8R1 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC0.45□□□□□ -2.34
Trav12-1A0N8R1 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.45□□□□□ -2.34
Trav12-1A0N8R1 Gm22800-201ENSMUST00000175627 94 ntBASIC0.45□□□□□ -2.34
Trav12-1A0N8R1 Gm16404-201ENSMUST00000177739 468 ntBASIC0.45□□□□□ -2.34
Trav12-1A0N8R1 Gm7958-201ENSMUST00000178255 468 ntBASIC0.45□□□□□ -2.34
Trav12-1A0N8R1 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC0.45□□□□□ -2.34
Trav12-1A0N8R1 Gm7950-201ENSMUST00000179633 468 ntBASIC0.45□□□□□ -2.34
Trav12-1A0N8R1 Gm21726-201ENSMUST00000179654 392 ntBASIC0.45□□□□□ -2.34
Trav12-1A0N8R1 Gm14598-201ENSMUST00000180109 468 ntBASIC0.45□□□□□ -2.34
Trav12-1A0N8R1 Gm14625-201ENSMUST00000180231 468 ntBASIC0.45□□□□□ -2.34
Trav12-1A0N8R1 Gm27894-201ENSMUST00000184177 92 ntBASIC0.45□□□□□ -2.34
Trav12-1A0N8R1 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC0.45□□□□□ -2.34
Trav12-1A0N8R1 Gm42925-201ENSMUST00000197359 285 ntBASIC0.45□□□□□ -2.34
Trav12-1A0N8R1 Gm44446-201ENSMUST00000204864 255 ntBASIC0.45□□□□□ -2.34
Trav12-1A0N8R1 AC168062.3-201ENSMUST00000227025 165 ntBASIC0.45□□□□□ -2.34
Trav12-1A0N8R1 AC168062.2-201ENSMUST00000228907 422 ntBASIC0.45□□□□□ -2.34
Trav12-1A0N8R1 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC0.45□□□□□ -2.34
Trav12-1A0N8R1 Gm38388-201ENSMUST00000195569 1430 ntBASIC0.45□□□□□ -2.34
Trav12-1A0N8R1 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC0.45□□□□□ -2.34
Trav12-1A0N8R1 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
Trav12-1A0N8R1 Gm22750-201ENSMUST00000102076 103 ntBASIC0.44□□□□□ -2.34
Trav12-1A0N8R1 Gm26338-201ENSMUST00000102372 110 ntBASIC0.44□□□□□ -2.34
Trav12-1A0N8R1 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
Trav12-1A0N8R1 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.44□□□□□ -2.34
Trav12-1A0N8R1 Gm12044-201ENSMUST00000120335 213 ntBASIC0.44□□□□□ -2.34
Trav12-1A0N8R1 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC0.44□□□□□ -2.34
Trav12-1A0N8R1 Gm24366-201ENSMUST00000175383 86 ntBASIC0.44□□□□□ -2.34
Trav12-1A0N8R1 Gm26236-201ENSMUST00000175536 137 ntBASIC0.44□□□□□ -2.34
Trav12-1A0N8R1 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
Trav12-1A0N8R1 Mir7062-201ENSMUST00000185038 66 ntBASIC0.44□□□□□ -2.34
Trav12-1A0N8R1 Gm38060-201ENSMUST00000194822 464 ntBASIC0.44□□□□□ -2.34
Trav12-1A0N8R1 Gm34015-201ENSMUST00000194908 451 ntBASIC0.44□□□□□ -2.34
Trav12-1A0N8R1 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
Trav12-1A0N8R1 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC0.44□□□□□ -2.34
Trav12-1A0N8R1 Gm45965-201ENSMUST00000221192 1284 ntBASIC0.44□□□□□ -2.34
Trav12-1A0N8R1 Gm22302-201ENSMUST00000082657 106 ntBASIC0.44□□□□□ -2.34
Trav12-1A0N8R1 Gm25578-201ENSMUST00000083406 104 ntBASIC0.44□□□□□ -2.34
Trav12-1A0N8R1 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
Trav12-1A0N8R1 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC0.44□□□□□ -2.34
Trav12-1A0N8R1 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
Trav12-1A0N8R1 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
Trav12-1A0N8R1 Mup-ps14-201ENSMUST00000118437 532 ntBASIC0.43□□□□□ -2.34
Trav12-1A0N8R1 Gm14852-201ENSMUST00000120065 647 ntBASIC0.43□□□□□ -2.34
Trav12-1A0N8R1 Gm24385-201ENSMUST00000122694 350 ntBASIC0.43□□□□□ -2.34
Trav12-1A0N8R1 Gm22027-201ENSMUST00000122737 127 ntBASIC0.43□□□□□ -2.34
Trav12-1A0N8R1 Mup-ps2-201ENSMUST00000142602 533 ntBASIC0.43□□□□□ -2.34
Trav12-1A0N8R1 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.43□□□□□ -2.34
Trav12-1A0N8R1 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
Trav12-1A0N8R1 Mir6240-201ENSMUST00000184281 117 ntBASIC0.43□□□□□ -2.34
Trav12-1A0N8R1 Gm29134-201ENSMUST00000186579 126 ntBASIC0.43□□□□□ -2.34
Trav12-1A0N8R1 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
Trav12-1A0N8R1 Gm28337-201ENSMUST00000190425 666 ntBASIC0.43□□□□□ -2.34
Trav12-1A0N8R1 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC0.43□□□□□ -2.34
Trav12-1A0N8R1 Gm31123-201ENSMUST00000192094 666 ntBASIC0.43□□□□□ -2.34
Trav12-1A0N8R1 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC0.43□□□□□ -2.34
Trav12-1A0N8R1 AC069561.3-201ENSMUST00000217321 114 ntBASIC0.43□□□□□ -2.34
Trav12-1A0N8R1 AL645546.2-201ENSMUST00000224526 265 ntBASIC0.43□□□□□ -2.34
Trav12-1A0N8R1 AC154730.1-201ENSMUST00000227874 816 ntBASIC0.43□□□□□ -2.34
Trav12-1A0N8R1 Gm14937-201ENSMUST00000119709 208 ntBASIC0.42□□□□□ -2.34
Trav12-1A0N8R1 Gm24598-201ENSMUST00000122510 74 ntBASIC0.42□□□□□ -2.34
Trav12-1A0N8R1 Gm22228-201ENSMUST00000157364 101 ntBASIC0.42□□□□□ -2.34
Trav12-1A0N8R1 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
Trav12-1A0N8R1 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC0.42□□□□□ -2.34
Trav12-1A0N8R1 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
Trav12-1A0N8R1 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC0.41□□□□□ -2.34
Trav12-1A0N8R1 Gm23854-201ENSMUST00000158378 108 ntBASIC0.41□□□□□ -2.34
Trav12-1A0N8R1 Gm20415-201ENSMUST00000172877 423 ntBASIC0.41□□□□□ -2.34
Trav12-1A0N8R1 Gm22929-201ENSMUST00000175517 107 ntBASIC0.41□□□□□ -2.34
Trav12-1A0N8R1 Gm23419-201ENSMUST00000175523 84 ntBASIC0.41□□□□□ -2.34
Trav12-1A0N8R1 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC0.41□□□□□ -2.34
Trav12-1A0N8R1 Gm23090-201ENSMUST00000177331 78 ntBASIC0.41□□□□□ -2.34
Trav12-1A0N8R1 Gm23355-201ENSMUST00000177614 107 ntBASIC0.41□□□□□ -2.34
Trav12-1A0N8R1 Gm27974-201ENSMUST00000183415 105 ntBASIC0.41□□□□□ -2.34
Trav12-1A0N8R1 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.41□□□□□ -2.34
Trav12-1A0N8R1 Gm8151-201ENSMUST00000184817 871 ntBASIC0.41□□□□□ -2.34
Trav12-1A0N8R1 Gm9236-201ENSMUST00000196892 587 ntBASIC0.41□□□□□ -2.34
Trav12-1A0N8R1 Mir7118-201ENSMUST00000197760 61 ntBASIC0.41□□□□□ -2.34
Trav12-1A0N8R1 Gm44254-201ENSMUST00000204184 322 ntBASIC0.41□□□□□ -2.34
Trav12-1A0N8R1 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC0.41□□□□□ -2.34
Trav12-1A0N8R1 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC0.41□□□□□ -2.34
Trav12-1A0N8R1 Gm18488-201ENSMUST00000215082 364 ntBASIC0.41□□□□□ -2.34
Trav12-1A0N8R1 Gm18729-201ENSMUST00000217230 621 ntBASIC0.41□□□□□ -2.34
Trav12-1A0N8R1 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC0.41□□□□□ -2.34
Trav12-1A0N8R1 Gm23721-201ENSMUST00000083005 107 ntBASIC0.41□□□□□ -2.34
Trav12-1A0N8R1 Gm23042-201ENSMUST00000083866 101 ntBASIC0.41□□□□□ -2.34
Trav12-1A0N8R1 Mir362-201ENSMUST00000093592 65 ntBASIC0.41□□□□□ -2.34
Trav12-1A0N8R1 Mir695-201ENSMUST00000102261 109 ntBASIC0.4□□□□□ -2.35
Trav12-1A0N8R1 Gm26082-201ENSMUST00000104070 127 ntBASIC0.4□□□□□ -2.35
Trav12-1A0N8R1 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC0.4□□□□□ -2.35
Trav12-1A0N8R1 Gm23277-201ENSMUST00000157914 136 ntBASIC0.4□□□□□ -2.35
Trav12-1A0N8R1 Gm17377-201ENSMUST00000165184 207 ntBASIC0.4□□□□□ -2.35
Trav12-1A0N8R1 Gm22510-201ENSMUST00000179304 79 ntBASIC0.4□□□□□ -2.35
Trav12-1A0N8R1 Gm26336-201ENSMUST00000179449 79 ntBASIC0.4□□□□□ -2.35
Trav12-1A0N8R1 Gm26390-201ENSMUST00000179628 79 ntBASIC0.4□□□□□ -2.35
Trav12-1A0N8R1 AL669916.3-201ENSMUST00000213855 94 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms