Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm11407-201ENSMUST00000120362 1058 ntBASIC1.81□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm14709-201ENSMUST00000121225 304 ntBASIC1.81□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm24598-201ENSMUST00000122510 74 ntBASIC1.81□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC1.81□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm24573-201ENSMUST00000175499 112 ntBASIC1.81□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm27511-201ENSMUST00000183502 127 ntBASIC1.81□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm27979-201ENSMUST00000185126 56 ntBASIC1.81□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.81□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm37658-201ENSMUST00000192672 315 ntBASIC1.81□□□□□ -2.12
Pcdhgb8A0A140LI48 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.81□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm43739-201ENSMUST00000198294 307 ntBASIC1.81□□□□□ -2.12
Pcdhgb8A0A140LI48 Mir497-201ENSMUST00000200557 84 ntBASIC1.81□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.81□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm44446-201ENSMUST00000204864 255 ntBASIC1.81□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm44910-201ENSMUST00000208451 396 ntBASIC1.81□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm2829-201ENSMUST00000213121 499 ntBASIC1.81□□□□□ -2.12
Pcdhgb8A0A140LI48 AC153541.1-201ENSMUST00000213786 294 ntBASIC1.81□□□□□ -2.12
Pcdhgb8A0A140LI48 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.81□□□□□ -2.12
Pcdhgb8A0A140LI48 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC1.81□□□□□ -2.12
Pcdhgb8A0A140LI48 Mir322-201ENSMUST00000083484 95 ntBASIC1.81□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.81□□□□□ -2.12
Pcdhgb8A0A140LI48 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Pcdhgb8A0A140LI48 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm16242-201ENSMUST00000117741 334 ntBASIC1.8□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC1.8□□□□□ -2.12
Pcdhgb8A0A140LI48 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.8□□□□□ -2.12
Pcdhgb8A0A140LI48 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm25956-201ENSMUST00000175115 217 ntBASIC1.8□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm19932-201ENSMUST00000177033 313 ntBASIC1.8□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm22166-201ENSMUST00000178419 121 ntBASIC1.8□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm23288-201ENSMUST00000179213 121 ntBASIC1.8□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC1.8□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.8□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC1.8□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC1.8□□□□□ -2.12
Pcdhgb8A0A140LI48 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.8□□□□□ -2.12
Pcdhgb8A0A140LI48 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.8□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm43676-201ENSMUST00000197532 540 ntBASIC1.8□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.8□□□□□ -2.12
Pcdhgb8A0A140LI48 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Pcdhgb8A0A140LI48 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Pcdhgb8A0A140LI48 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.8□□□□□ -2.12
Pcdhgb8A0A140LI48 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Pcdhgb8A0A140LI48 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Pcdhgb8A0A140LI48 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm14823-201ENSMUST00000117698 238 ntBASIC1.79□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm13588-201ENSMUST00000120026 135 ntBASIC1.79□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm22727-201ENSMUST00000158090 116 ntBASIC1.79□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC1.79□□□□□ -2.12
Pcdhgb8A0A140LI48 Mir6950-201ENSMUST00000184438 73 ntBASIC1.79□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm27385-201ENSMUST00000184747 104 ntBASIC1.79□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm29352-201ENSMUST00000188054 544 ntBASIC1.79□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm18971-201ENSMUST00000197240 374 ntBASIC1.79□□□□□ -2.12
Pcdhgb8A0A140LI48 Mir3961-201ENSMUST00000198795 59 ntBASIC1.79□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm43583-201ENSMUST00000199235 303 ntBASIC1.79□□□□□ -2.12
Pcdhgb8A0A140LI48 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC1.79□□□□□ -2.12
Pcdhgb8A0A140LI48 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.79□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm18617-201ENSMUST00000222311 259 ntBASIC1.79□□□□□ -2.12
Pcdhgb8A0A140LI48 Mir222-201ENSMUST00000083537 79 ntBASIC1.79□□□□□ -2.12
Pcdhgb8A0A140LI48 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Pcdhgb8A0A140LI48 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.79□□□□□ -2.12
Pcdhgb8A0A140LI48 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Pcdhgb8A0A140LI48 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.78□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm14943-201ENSMUST00000118056 546 ntBASIC1.78□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm5396-201ENSMUST00000121222 532 ntBASIC1.78□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.78□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm23523-201ENSMUST00000180190 107 ntBASIC1.78□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm28648-201ENSMUST00000190092 343 ntBASIC1.78□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm43512-201ENSMUST00000198495 176 ntBASIC1.78□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm44142-201ENSMUST00000203358 311 ntBASIC1.78□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm44533-201ENSMUST00000207782 268 ntBASIC1.78□□□□□ -2.12
Pcdhgb8A0A140LI48 Gm18453-201ENSMUST00000208000 626 ntBASIC1.78□□□□□ -2.12
Pcdhgb8A0A140LI48 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.78□□□□□ -2.12
Pcdhgb8A0A140LI48 AC144733.1-201ENSMUST00000222893 1289 ntBASIC1.78□□□□□ -2.12
Pcdhgb8A0A140LI48 AC183092.2-201ENSMUST00000225542 1153 ntBASIC1.78□□□□□ -2.12
Pcdhgb8A0A140LI48 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Pcdhgb8A0A140LI48 Mir429-201ENSMUST00000083493 83 ntBASIC1.78□□□□□ -2.12
Pcdhgb8A0A140LI48 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.78□□□□□ -2.13
Pcdhgb8A0A140LI48 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.77□□□□□ -2.13
Pcdhgb8A0A140LI48 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Pcdhgb8A0A140LI48 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.77□□□□□ -2.13
Pcdhgb8A0A140LI48 Gm24338-201ENSMUST00000104205 127 ntBASIC1.77□□□□□ -2.13
Pcdhgb8A0A140LI48 Gm25507-201ENSMUST00000116981 144 ntBASIC1.77□□□□□ -2.13
Pcdhgb8A0A140LI48 Gm13672-201ENSMUST00000117554 459 ntBASIC1.77□□□□□ -2.13
Pcdhgb8A0A140LI48 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.77□□□□□ -2.13
Pcdhgb8A0A140LI48 Gm22768-201ENSMUST00000158366 153 ntBASIC1.77□□□□□ -2.13
Pcdhgb8A0A140LI48 Gm25163-201ENSMUST00000158905 104 ntBASIC1.77□□□□□ -2.13
Pcdhgb8A0A140LI48 Gm23548-201ENSMUST00000158963 106 ntBASIC1.77□□□□□ -2.13
Pcdhgb8A0A140LI48 Gm5277-201ENSMUST00000164923 556 ntBASIC1.77□□□□□ -2.13
Pcdhgb8A0A140LI48 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.77□□□□□ -2.13
Pcdhgb8A0A140LI48 Mir6997-201ENSMUST00000184313 71 ntBASIC1.77□□□□□ -2.13
Pcdhgb8A0A140LI48 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Pcdhgb8A0A140LI48 Gm28437-201ENSMUST00000190277 783 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 252.1 ms