Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm14972-201ENSMUST00000121780 364 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm22960-201ENSMUST00000122517 104 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm22027-201ENSMUST00000122737 127 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm25392-201ENSMUST00000157335 297 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm22226-201ENSMUST00000157355 109 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm24963-201ENSMUST00000157916 144 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm22983-201ENSMUST00000158308 104 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Igkv17-134-201ENSMUST00000168310 348 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm25933-201ENSMUST00000178943 108 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Mir3569-201ENSMUST00000185080 58 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm28560-201ENSMUST00000186091 315 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm28334-201ENSMUST00000186653 315 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm28495-201ENSMUST00000188452 315 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm28232-201ENSMUST00000188683 315 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm28481-201ENSMUST00000189231 315 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm29059-201ENSMUST00000191534 315 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm37765-201ENSMUST00000192395 315 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm37237-201ENSMUST00000192893 315 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm37869-201ENSMUST00000193385 595 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm36968-201ENSMUST00000193737 315 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm38290-201ENSMUST00000195238 315 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm45704-201ENSMUST00000212582 403 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm45263-201ENSMUST00000210377 1375 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Mir710-201ENSMUST00000102088 110 ntBASIC0□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm7350-201ENSMUST00000120964 636 ntBASIC0□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm25901-201ENSMUST00000158494 130 ntBASIC0□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm27289-201ENSMUST00000183341 82 ntBASIC0□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm27475-201ENSMUST00000183420 61 ntBASIC0□□□□□ -2.41
Trav4-3A0A0B4J1K1 Mir6389-201ENSMUST00000183661 102 ntBASIC0□□□□□ -2.41
Trav4-3A0A0B4J1K1 Mir7065-201ENSMUST00000185110 61 ntBASIC0□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm38149-201ENSMUST00000191943 339 ntBASIC0□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm37096-201ENSMUST00000192317 2058 ntBASIC0□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm38154-201ENSMUST00000195444 340 ntBASIC0□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm43583-201ENSMUST00000199235 303 ntBASIC0□□□□□ -2.41
Trav4-3A0A0B4J1K1 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC0□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm19428-201ENSMUST00000220512 1995 ntBASIC0□□□□□ -2.41
Trav4-3A0A0B4J1K1 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC0□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm24311-201ENSMUST00000082570 104 ntBASIC0□□□□□ -2.41
Trav4-3A0A0B4J1K1 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm14761-201ENSMUST00000121363 262 ntBASIC-0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm23230-201ENSMUST00000157298 133 ntBASIC-0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm23114-201ENSMUST00000158478 117 ntBASIC-0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC-0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm25598-201ENSMUST00000179031 107 ntBASIC-0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm27522-201ENSMUST00000183949 230 ntBASIC-0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm27894-201ENSMUST00000184177 92 ntBASIC-0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Mir3068-202ENSMUST00000197755 79 ntBASIC-0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm43955-201ENSMUST00000204332 142 ntBASIC-0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 AC123062.1-201ENSMUST00000221287 481 ntBASIC-0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm26328-201ENSMUST00000082821 107 ntBASIC-0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm25794-201ENSMUST00000083286 107 ntBASIC-0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm23650-201ENSMUST00000083355 70 ntBASIC-0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 AC124426.1-203ENSMUST00000221814 1362 ntBASIC-0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm23431-201ENSMUST00000104006 107 ntBASIC-0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm11065-201ENSMUST00000111462 228 ntBASIC-0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm24833-201ENSMUST00000116775 120 ntBASIC-0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm12370-201ENSMUST00000117809 604 ntBASIC-0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm14362-201ENSMUST00000121679 273 ntBASIC-0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm11358-201ENSMUST00000122310 373 ntBASIC-0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 n-R5s18-201ENSMUST00000122740 121 ntBASIC-0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm15254-201ENSMUST00000149567 273 ntBASIC-0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm23090-201ENSMUST00000177331 78 ntBASIC-0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm26285-201ENSMUST00000177923 107 ntBASIC-0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm27545-201ENSMUST00000184755 202 ntBASIC-0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Mir6540-201ENSMUST00000184886 108 ntBASIC-0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm18356-201ENSMUST00000185677 623 ntBASIC-0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm37693-201ENSMUST00000194562 234 ntBASIC-0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC-0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm43345-201ENSMUST00000199484 269 ntBASIC-0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC-0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm23622-201ENSMUST00000082460 107 ntBASIC-0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm25703-201ENSMUST00000083123 151 ntBASIC-0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC-0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC-0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC-0.03□□□□□ -2.41
Trav4-3A0A0B4J1K1 Mir804-201ENSMUST00000103251 95 ntBASIC-0.03□□□□□ -2.41
Trav4-3A0A0B4J1K1 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm23202-201ENSMUST00000104376 129 ntBASIC-0.03□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm14694-201ENSMUST00000121856 282 ntBASIC-0.03□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC-0.03□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm26358-201ENSMUST00000158215 97 ntBASIC-0.03□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm22765-201ENSMUST00000158371 128 ntBASIC-0.03□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm23854-201ENSMUST00000158378 108 ntBASIC-0.03□□□□□ -2.41
Trav4-3A0A0B4J1K1 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm25952-201ENSMUST00000175329 74 ntBASIC-0.03□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm6660-201ENSMUST00000179149 468 ntBASIC-0.03□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
Trav4-3A0A0B4J1K1 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm42925-201ENSMUST00000197359 285 ntBASIC-0.03□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm43513-201ENSMUST00000199779 1076 ntBASIC-0.03□□□□□ -2.41
Trav4-3A0A0B4J1K1 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC-0.03□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm43898-201ENSMUST00000204456 424 ntBASIC-0.03□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm17990-201ENSMUST00000211728 553 ntBASIC-0.03□□□□□ -2.41
Trav4-3A0A0B4J1K1 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC-0.03□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm22062-201ENSMUST00000082563 107 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms