Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Gm25163-201ENSMUST00000158905 104 ntBASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm26157-201ENSMUST00000158974 126 ntBASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm16584-201ENSMUST00000159267 189 ntBASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm24573-201ENSMUST00000175499 112 ntBASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm22264-201ENSMUST00000178200 107 ntBASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm27817-201ENSMUST00000184302 233 ntBASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm8151-201ENSMUST00000184817 871 ntBASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Mir6901-201ENSMUST00000185062 62 ntBASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm28151-201ENSMUST00000189404 951 ntBASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm18971-201ENSMUST00000197240 374 ntBASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Mir691-201ENSMUST00000199719 78 ntBASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm25853-201ENSMUST00000082793 132 ntBASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Mir322-201ENSMUST00000083484 95 ntBASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Mir29c-201ENSMUST00000083614 88 ntBASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm25859-201ENSMUST00000083710 91 ntBASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm11786-201ENSMUST00000120799 155 ntBASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm24478-201ENSMUST00000157439 158 ntBASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm25888-201ENSMUST00000157778 302 ntBASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm24438-201ENSMUST00000157893 115 ntBASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm24901-201ENSMUST00000158125 110 ntBASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm24837-201ENSMUST00000158683 81 ntBASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm7925-201ENSMUST00000166690 401 ntBASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm25707-201ENSMUST00000175120 96 ntBASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm22800-201ENSMUST00000175627 94 ntBASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm27722-201ENSMUST00000183908 76 ntBASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm27957-201ENSMUST00000184054 127 ntBASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm27385-201ENSMUST00000184747 104 ntBASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm28058-201ENSMUST00000186421 264 ntBASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm28648-201ENSMUST00000190092 343 ntBASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm44142-201ENSMUST00000203358 311 ntBASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm18453-201ENSMUST00000208000 626 ntBASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm45754-201ENSMUST00000212380 279 ntBASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 AC117656.1-201ENSMUST00000225826 339 ntBASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 AC154484.1-201ENSMUST00000227311 771 ntBASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm22062-201ENSMUST00000082563 107 ntBASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm26126-201ENSMUST00000083188 164 ntBASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm23462-201ENSMUST00000083264 104 ntBASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Snora33-201ENSMUST00000093556 129 ntBASIC1.37□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm23331-201ENSMUST00000157423 108 ntBASIC1.36□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm22666-201ENSMUST00000158717 164 ntBASIC1.36□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm23548-201ENSMUST00000158963 106 ntBASIC1.36□□□□□ -2.19
Trbv1A0A0B4J1G7 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm24388-201ENSMUST00000177872 107 ntBASIC1.36□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm23523-201ENSMUST00000180190 107 ntBASIC1.36□□□□□ -2.19
Trbv1A0A0B4J1G7 Mir6351-201ENSMUST00000183826 99 ntBASIC1.36□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm27878-201ENSMUST00000184000 106 ntBASIC1.36□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm27755-201ENSMUST00000184623 132 ntBASIC1.36□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.36□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm29352-201ENSMUST00000188054 544 ntBASIC1.36□□□□□ -2.19
Trbv1A0A0B4J1G7 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC1.36□□□□□ -2.19
Trbv1A0A0B4J1G7 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC1.36□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm44181-201ENSMUST00000203106 483 ntBASIC1.36□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.36□□□□□ -2.19
Trbv1A0A0B4J1G7 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC1.36□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm45375-201ENSMUST00000210338 280 ntBASIC1.36□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.36□□□□□ -2.19
Trbv1A0A0B4J1G7 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.36□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC1.36□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm22577-201ENSMUST00000083731 109 ntBASIC1.36□□□□□ -2.19
Trbv1A0A0B4J1G7 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.36□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Trbv1A0A0B4J1G7 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm22771-201ENSMUST00000104449 91 ntBASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 Mir669d-201ENSMUST00000104644 121 ntBASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm16242-201ENSMUST00000117741 334 ntBASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm24892-201ENSMUST00000122747 104 ntBASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm22328-201ENSMUST00000158074 112 ntBASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm25012-201ENSMUST00000158396 164 ntBASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm26864-201ENSMUST00000181346 156 ntBASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm11392-201ENSMUST00000181419 710 ntBASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm27624-201ENSMUST00000185047 177 ntBASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm37658-201ENSMUST00000192672 315 ntBASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm32175-201ENSMUST00000193641 346 ntBASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm44336-201ENSMUST00000203696 468 ntBASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms