Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm3867-201ENSMUST00000086108 279 ntBASIC2.11□□□□□ -2.07
Trav5-4A0A075B652 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
Trav5-4A0A075B652 Gm37661-201ENSMUST00000191863 1550 ntBASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Gm23175-201ENSMUST00000104371 132 ntBASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Gm12697-201ENSMUST00000118008 667 ntBASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Gm11359-201ENSMUST00000120039 567 ntBASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Gm15365-201ENSMUST00000122392 300 ntBASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Gm23980-201ENSMUST00000157135 158 ntBASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Gm24211-201ENSMUST00000158264 107 ntBASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Gm25956-201ENSMUST00000175115 217 ntBASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Gm9830-201ENSMUST00000178509 357 ntBASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Gm25933-201ENSMUST00000178943 108 ntBASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Gm7837-201ENSMUST00000190873 412 ntBASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Gm43367-201ENSMUST00000199986 625 ntBASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Gm43914-201ENSMUST00000203592 594 ntBASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Gm45879-201ENSMUST00000212521 392 ntBASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 AC130821.1-201ENSMUST00000221997 293 ntBASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Gm46389-201ENSMUST00000223199 392 ntBASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 AC134860.6-201ENSMUST00000226038 285 ntBASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Gm25651-201ENSMUST00000083782 119 ntBASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trav5-4A0A075B652 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.09□□□□□ -2.07
Trav5-4A0A075B652 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
Trav5-4A0A075B652 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.09□□□□□ -2.07
Trav5-4A0A075B652 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Trav5-4A0A075B652 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC2.09□□□□□ -2.07
Trav5-4A0A075B652 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.09□□□□□ -2.07
Trav5-4A0A075B652 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC2.09□□□□□ -2.07
Trav5-4A0A075B652 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC2.09□□□□□ -2.07
Trav5-4A0A075B652 Gm23600-201ENSMUST00000157260 71 ntBASIC2.09□□□□□ -2.07
Trav5-4A0A075B652 Gm24958-201ENSMUST00000158009 97 ntBASIC2.09□□□□□ -2.07
Trav5-4A0A075B652 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Trav5-4A0A075B652 Gm22308-201ENSMUST00000177609 107 ntBASIC2.09□□□□□ -2.07
Trav5-4A0A075B652 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.09□□□□□ -2.07
Trav5-4A0A075B652 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC2.09□□□□□ -2.07
Trav5-4A0A075B652 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Trav5-4A0A075B652 Gm37054-201ENSMUST00000193481 543 ntBASIC2.09□□□□□ -2.07
Trav5-4A0A075B652 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Trav5-4A0A075B652 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.09□□□□□ -2.07
Trav5-4A0A075B652 Gm10025-201ENSMUST00000079568 372 ntBASIC2.09□□□□□ -2.07
Trav5-4A0A075B652 Gm22997-201ENSMUST00000082845 107 ntBASIC2.09□□□□□ -2.07
Trav5-4A0A075B652 Gm25896-201ENSMUST00000083713 136 ntBASIC2.09□□□□□ -2.07
Trav5-4A0A075B652 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.09□□□□□ -2.08
Trav5-4A0A075B652 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
Trav5-4A0A075B652 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Trav5-4A0A075B652 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Mir701-201ENSMUST00000102208 109 ntBASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Gm11512-201ENSMUST00000119669 663 ntBASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Gm14821-201ENSMUST00000121975 435 ntBASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Gm22718-201ENSMUST00000122701 315 ntBASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Gm25368-201ENSMUST00000158847 131 ntBASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Mir28b-201ENSMUST00000175399 80 ntBASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Gm20718-201ENSMUST00000176058 259 ntBASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Gm27220-201ENSMUST00000183453 262 ntBASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Gm27317-201ENSMUST00000183533 95 ntBASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Gm37128-201ENSMUST00000192599 232 ntBASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Gm43722-201ENSMUST00000196054 124 ntBASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Gm44337-201ENSMUST00000196553 114 ntBASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Gm43676-201ENSMUST00000197532 540 ntBASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Gm3724-201ENSMUST00000197957 349 ntBASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 AC126267.1-201ENSMUST00000214282 284 ntBASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 AC147240.1-201ENSMUST00000218767 431 ntBASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 AC104832.1-201ENSMUST00000222938 550 ntBASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Gm23627-201ENSMUST00000082459 107 ntBASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Gm22502-201ENSMUST00000082488 107 ntBASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Gm22977-201ENSMUST00000082615 107 ntBASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Gm24149-201ENSMUST00000082757 107 ntBASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Trav5-4A0A075B652 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trav5-4A0A075B652 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trav5-4A0A075B652 Gm37096-201ENSMUST00000192317 2058 ntBASIC2.07□□□□□ -2.08
Trav5-4A0A075B652 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
Trav5-4A0A075B652 Gm24282-201ENSMUST00000104232 66 ntBASIC2.07□□□□□ -2.08
Trav5-4A0A075B652 Gm23223-201ENSMUST00000158119 127 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms