Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
Trav6-6A0A075B603 Gm23516-201ENSMUST00000093728 107 ntBASIC0.82□□□□□ -2.28
Trav6-6A0A075B603 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
Trav6-6A0A075B603 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC0.82□□□□□ -2.28
Trav6-6A0A075B603 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Trav6-6A0A075B603 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC0.81□□□□□ -2.28
Trav6-6A0A075B603 Gm13672-201ENSMUST00000117554 459 ntBASIC0.81□□□□□ -2.28
Trav6-6A0A075B603 Gm14887-201ENSMUST00000119522 663 ntBASIC0.81□□□□□ -2.28
Trav6-6A0A075B603 Gm15807-201ENSMUST00000119880 1128 ntBASIC0.81□□□□□ -2.28
Trav6-6A0A075B603 Gm14551-201ENSMUST00000120802 256 ntBASIC0.81□□□□□ -2.28
Trav6-6A0A075B603 Gm15089-201ENSMUST00000122332 1196 ntBASIC0.81□□□□□ -2.28
Trav6-6A0A075B603 Gm23118-201ENSMUST00000122657 187 ntBASIC0.81□□□□□ -2.28
Trav6-6A0A075B603 Mir1967-201ENSMUST00000157789 82 ntBASIC0.81□□□□□ -2.28
Trav6-6A0A075B603 Gm15914-201ENSMUST00000161922 309 ntBASIC0.81□□□□□ -2.28
Trav6-6A0A075B603 Gm3025-201ENSMUST00000163454 489 ntBASIC0.81□□□□□ -2.28
Trav6-6A0A075B603 Gm2878-201ENSMUST00000170173 486 ntBASIC0.81□□□□□ -2.28
Trav6-6A0A075B603 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Trav6-6A0A075B603 AC160863.1-201ENSMUST00000218412 317 ntBASIC0.81□□□□□ -2.28
Trav6-6A0A075B603 Gm26493-201ENSMUST00000083155 136 ntBASIC0.81□□□□□ -2.28
Trav6-6A0A075B603 Gm25683-201ENSMUST00000083940 131 ntBASIC0.81□□□□□ -2.28
Trav6-6A0A075B603 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC0.81□□□□□ -2.28
Trav6-6A0A075B603 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Trav6-6A0A075B603 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Trav6-6A0A075B603 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Trav6-6A0A075B603 Gm14624-201ENSMUST00000117746 192 ntBASIC0.8□□□□□ -2.28
Trav6-6A0A075B603 Gm15090-201ENSMUST00000118787 1196 ntBASIC0.8□□□□□ -2.28
Trav6-6A0A075B603 Gm12053-201ENSMUST00000119022 252 ntBASIC0.8□□□□□ -2.28
Trav6-6A0A075B603 Gm11849-201ENSMUST00000121293 261 ntBASIC0.8□□□□□ -2.28
Trav6-6A0A075B603 Gm6568-201ENSMUST00000122274 697 ntBASIC0.8□□□□□ -2.28
Trav6-6A0A075B603 n-R5s80-201ENSMUST00000122596 111 ntBASIC0.8□□□□□ -2.28
Trav6-6A0A075B603 Gm23829-201ENSMUST00000157392 270 ntBASIC0.8□□□□□ -2.28
Trav6-6A0A075B603 Gm25423-201ENSMUST00000157609 107 ntBASIC0.8□□□□□ -2.28
Trav6-6A0A075B603 Gm22186-201ENSMUST00000157822 122 ntBASIC0.8□□□□□ -2.28
Trav6-6A0A075B603 Gm24851-201ENSMUST00000158028 103 ntBASIC0.8□□□□□ -2.28
Trav6-6A0A075B603 Gm22074-201ENSMUST00000158595 113 ntBASIC0.8□□□□□ -2.28
Trav6-6A0A075B603 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC0.8□□□□□ -2.28
Trav6-6A0A075B603 Gm19123-201ENSMUST00000190716 651 ntBASIC0.8□□□□□ -2.28
Trav6-6A0A075B603 Gm37361-201ENSMUST00000194345 132 ntBASIC0.8□□□□□ -2.28
Trav6-6A0A075B603 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC0.8□□□□□ -2.28
Trav6-6A0A075B603 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC0.8□□□□□ -2.28
Trav6-6A0A075B603 AC101677.1-201ENSMUST00000218590 158 ntBASIC0.8□□□□□ -2.28
Trav6-6A0A075B603 AC138290.2-201ENSMUST00000218822 369 ntBASIC0.8□□□□□ -2.28
Trav6-6A0A075B603 AC130829.3-201ENSMUST00000222735 154 ntBASIC0.8□□□□□ -2.28
Trav6-6A0A075B603 AL590614.1-201ENSMUST00000226037 268 ntBASIC0.8□□□□□ -2.28
Trav6-6A0A075B603 Snord14a-201ENSMUST00000082807 87 ntBASIC0.8□□□□□ -2.28
Trav6-6A0A075B603 Mir221-201ENSMUST00000083488 95 ntBASIC0.8□□□□□ -2.28
Trav6-6A0A075B603 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Trav6-6A0A075B603 Mir687-201ENSMUST00000102166 89 ntBASIC0.79□□□□□ -2.28
Trav6-6A0A075B603 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
Trav6-6A0A075B603 Gm23336-201ENSMUST00000117023 123 ntBASIC0.79□□□□□ -2.28
Trav6-6A0A075B603 Gm15443-201ENSMUST00000118947 820 ntBASIC0.79□□□□□ -2.28
Trav6-6A0A075B603 Gm23083-201ENSMUST00000157851 116 ntBASIC0.79□□□□□ -2.28
Trav6-6A0A075B603 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC0.79□□□□□ -2.28
Trav6-6A0A075B603 Gm23090-201ENSMUST00000177331 78 ntBASIC0.79□□□□□ -2.28
Trav6-6A0A075B603 Gm22290-201ENSMUST00000177655 107 ntBASIC0.79□□□□□ -2.28
Trav6-6A0A075B603 Gm22583-201ENSMUST00000178031 107 ntBASIC0.79□□□□□ -2.28
Trav6-6A0A075B603 Gm27419-201ENSMUST00000184576 109 ntBASIC0.79□□□□□ -2.28
Trav6-6A0A075B603 Gm21673-201ENSMUST00000186640 436 ntBASIC0.79□□□□□ -2.28
Trav6-6A0A075B603 Gm21135-201ENSMUST00000189023 436 ntBASIC0.79□□□□□ -2.28
Trav6-6A0A075B603 Ighv2-8-201ENSMUST00000193935 262 ntBASIC0.79□□□□□ -2.28
Trav6-6A0A075B603 Gm9402-201ENSMUST00000196849 388 ntBASIC0.79□□□□□ -2.28
Trav6-6A0A075B603 Gm43529-201ENSMUST00000199178 412 ntBASIC0.79□□□□□ -2.28
Trav6-6A0A075B603 Gm19032-201ENSMUST00000208584 592 ntBASIC0.79□□□□□ -2.28
Trav6-6A0A075B603 Gm17990-201ENSMUST00000211728 553 ntBASIC0.79□□□□□ -2.28
Trav6-6A0A075B603 Gm45907-201ENSMUST00000213023 193 ntBASIC0.79□□□□□ -2.28
Trav6-6A0A075B603 Gm2829-201ENSMUST00000213121 499 ntBASIC0.79□□□□□ -2.28
Trav6-6A0A075B603 AL450317.1-201ENSMUST00000213941 291 ntBASIC0.79□□□□□ -2.28
Trav6-6A0A075B603 AC112935.1-201ENSMUST00000227603 250 ntBASIC0.79□□□□□ -2.28
Trav6-6A0A075B603 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
Trav6-6A0A075B603 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Trav6-6A0A075B603 AC162910.1-201ENSMUST00000221219 1723 ntBASIC0.78□□□□□ -2.28
Trav6-6A0A075B603 Gm381-201ENSMUST00000117443 2037 ntBASIC0.78□□□□□ -2.28
Trav6-6A0A075B603 Gm26080-201ENSMUST00000104069 131 ntBASIC0.78□□□□□ -2.28
Trav6-6A0A075B603 Gm25563-201ENSMUST00000104603 74 ntBASIC0.78□□□□□ -2.28
Trav6-6A0A075B603 Mir466n-201ENSMUST00000104798 94 ntBASIC0.78□□□□□ -2.28
Trav6-6A0A075B603 Gm12636-201ENSMUST00000117395 624 ntBASIC0.78□□□□□ -2.28
Trav6-6A0A075B603 Gm12512-201ENSMUST00000119620 217 ntBASIC0.78□□□□□ -2.28
Trav6-6A0A075B603 Gm14972-201ENSMUST00000121780 364 ntBASIC0.78□□□□□ -2.28
Trav6-6A0A075B603 Gm14402-201ENSMUST00000122217 508 ntBASIC0.78□□□□□ -2.28
Trav6-6A0A075B603 Gm24598-201ENSMUST00000122510 74 ntBASIC0.78□□□□□ -2.28
Trav6-6A0A075B603 Gm24915-201ENSMUST00000157288 78 ntBASIC0.78□□□□□ -2.28
Trav6-6A0A075B603 Gm24480-201ENSMUST00000157442 103 ntBASIC0.78□□□□□ -2.28
Trav6-6A0A075B603 Gm26029-201ENSMUST00000158659 132 ntBASIC0.78□□□□□ -2.28
Trav6-6A0A075B603 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.78□□□□□ -2.28
Trav6-6A0A075B603 Gm22716-201ENSMUST00000177596 107 ntBASIC0.78□□□□□ -2.28
Trav6-6A0A075B603 Mir6380-201ENSMUST00000184334 81 ntBASIC0.78□□□□□ -2.28
Trav6-6A0A075B603 Gm28437-201ENSMUST00000190277 783 ntBASIC0.78□□□□□ -2.28
Trav6-6A0A075B603 Gm43004-201ENSMUST00000201872 703 ntBASIC0.78□□□□□ -2.28
Trav6-6A0A075B603 Gm45456-201ENSMUST00000210841 243 ntBASIC0.78□□□□□ -2.28
Trav6-6A0A075B603 AC154552.7-201ENSMUST00000222824 156 ntBASIC0.78□□□□□ -2.28
Trav6-6A0A075B603 Gm25698-201ENSMUST00000082897 107 ntBASIC0.78□□□□□ -2.28
Trav6-6A0A075B603 Gm23462-201ENSMUST00000083264 104 ntBASIC0.78□□□□□ -2.28
Trav6-6A0A075B603 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
Trav6-6A0A075B603 Gm25421-201ENSMUST00000104218 164 ntBASIC0.77□□□□□ -2.29
Trav6-6A0A075B603 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.77□□□□□ -2.29
Trav6-6A0A075B603 Defa-ps8-201ENSMUST00000120972 279 ntBASIC0.77□□□□□ -2.29
Trav6-6A0A075B603 Gm23124-201ENSMUST00000157650 107 ntBASIC0.77□□□□□ -2.29
Trav6-6A0A075B603 Gm16399-201ENSMUST00000181423 219 ntBASIC0.77□□□□□ -2.29
Trav6-6A0A075B603 Mir7063-201ENSMUST00000184158 91 ntBASIC0.77□□□□□ -2.29
Trav6-6A0A075B603 Mir7675-201ENSMUST00000184262 58 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms