Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
H2afb1S4R1E0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2afb1S4R1E0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2afb1S4R1E0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2afb1S4R1E0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2afb1S4R1E0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2afb1S4R1E0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2afb1S4R1E0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
H2afb1S4R1E0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.48■□□□□ 0.07
H2afb1S4R1E0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
H2afb1S4R1E0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2afb1S4R1E0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2afb1S4R1E0 Gm10602-201ENSMUST00000098239 609 ntBASIC15.48■□□□□ 0.07
H2afb1S4R1E0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2afb1S4R1E0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2afb1S4R1E0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2afb1S4R1E0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.48■□□□□ 0.07
H2afb1S4R1E0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2afb1S4R1E0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.48■□□□□ 0.07
H2afb1S4R1E0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2afb1S4R1E0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2afb1S4R1E0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2afb1S4R1E0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2afb1S4R1E0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2afb1S4R1E0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.48■□□□□ 0.07
H2afb1S4R1E0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
H2afb1S4R1E0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2afb1S4R1E0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2afb1S4R1E0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.47■□□□□ 0.07
H2afb1S4R1E0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
H2afb1S4R1E0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2afb1S4R1E0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
H2afb1S4R1E0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2afb1S4R1E0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
H2afb1S4R1E0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2afb1S4R1E0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2afb1S4R1E0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2afb1S4R1E0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2afb1S4R1E0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.47■□□□□ 0.07
H2afb1S4R1E0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2afb1S4R1E0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2afb1S4R1E0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
H2afb1S4R1E0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2afb1S4R1E0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
H2afb1S4R1E0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
H2afb1S4R1E0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.46■□□□□ 0.07
H2afb1S4R1E0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.46■□□□□ 0.07
H2afb1S4R1E0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
H2afb1S4R1E0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
H2afb1S4R1E0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
H2afb1S4R1E0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
H2afb1S4R1E0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
H2afb1S4R1E0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
H2afb1S4R1E0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
H2afb1S4R1E0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.46■□□□□ 0.07
H2afb1S4R1E0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.46■□□□□ 0.07
H2afb1S4R1E0 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
H2afb1S4R1E0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
H2afb1S4R1E0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
H2afb1S4R1E0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
H2afb1S4R1E0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
H2afb1S4R1E0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.46■□□□□ 0.06
H2afb1S4R1E0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
H2afb1S4R1E0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Gm13401-201ENSMUST00000117074 291 ntBASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Gm15375-201ENSMUST00000119510 849 ntBASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
H2afb1S4R1E0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.45■□□□□ 0.06
H2afb1S4R1E0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb1S4R1E0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb1S4R1E0 Dio3-201ENSMUST00000097228 1449 ntBASIC15.44■□□□□ 0.06
H2afb1S4R1E0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.44■□□□□ 0.06
H2afb1S4R1E0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms