Protein–RNA interactions for Protein: Q9Z1G3

Atp6v1c1, V-type proton ATPase subunit C 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c1Q9Z1G3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Atp6v1c1Q9Z1G3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Atp6v1c1Q9Z1G3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atp6v1c1Q9Z1G3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Atp6v1c1Q9Z1G3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atp6v1c1Q9Z1G3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Atp6v1c1Q9Z1G3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Atp6v1c1Q9Z1G3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Atp6v1c1Q9Z1G3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atp6v1c1Q9Z1G3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atp6v1c1Q9Z1G3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atp6v1c1Q9Z1G3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atp6v1c1Q9Z1G3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atp6v1c1Q9Z1G3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atp6v1c1Q9Z1G3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atp6v1c1Q9Z1G3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.74■□□□□ 0.27
Atp6v1c1Q9Z1G3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atp6v1c1Q9Z1G3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.74■□□□□ 0.27
Atp6v1c1Q9Z1G3 Gm10849-201ENSMUST00000100397 618 ntBASIC16.74■□□□□ 0.27
Atp6v1c1Q9Z1G3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Atp6v1c1Q9Z1G3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.74■□□□□ 0.27
Atp6v1c1Q9Z1G3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.74■□□□□ 0.27
Atp6v1c1Q9Z1G3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atp6v1c1Q9Z1G3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atp6v1c1Q9Z1G3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.74■□□□□ 0.27
Atp6v1c1Q9Z1G3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atp6v1c1Q9Z1G3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Atp6v1c1Q9Z1G3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
Atp6v1c1Q9Z1G3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atp6v1c1Q9Z1G3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.74■□□□□ 0.27
Atp6v1c1Q9Z1G3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atp6v1c1Q9Z1G3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atp6v1c1Q9Z1G3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.73■□□□□ 0.27
Atp6v1c1Q9Z1G3 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.73■□□□□ 0.27
Atp6v1c1Q9Z1G3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.73■□□□□ 0.27
Atp6v1c1Q9Z1G3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Atp6v1c1Q9Z1G3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atp6v1c1Q9Z1G3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Atp6v1c1Q9Z1G3 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Atp6v1c1Q9Z1G3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.73■□□□□ 0.27
Atp6v1c1Q9Z1G3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.73■□□□□ 0.27
Atp6v1c1Q9Z1G3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atp6v1c1Q9Z1G3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Atp6v1c1Q9Z1G3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atp6v1c1Q9Z1G3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Atp6v1c1Q9Z1G3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atp6v1c1Q9Z1G3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Atp6v1c1Q9Z1G3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atp6v1c1Q9Z1G3 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.72■□□□□ 0.27
Atp6v1c1Q9Z1G3 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atp6v1c1Q9Z1G3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Atp6v1c1Q9Z1G3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Atp6v1c1Q9Z1G3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.72■□□□□ 0.27
Atp6v1c1Q9Z1G3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.72■□□□□ 0.27
Atp6v1c1Q9Z1G3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atp6v1c1Q9Z1G3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.72■□□□□ 0.27
Atp6v1c1Q9Z1G3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Atp6v1c1Q9Z1G3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Atp6v1c1Q9Z1G3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atp6v1c1Q9Z1G3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atp6v1c1Q9Z1G3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atp6v1c1Q9Z1G3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atp6v1c1Q9Z1G3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.72■□□□□ 0.27
Atp6v1c1Q9Z1G3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Atp6v1c1Q9Z1G3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atp6v1c1Q9Z1G3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atp6v1c1Q9Z1G3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atp6v1c1Q9Z1G3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Atp6v1c1Q9Z1G3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Atp6v1c1Q9Z1G3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atp6v1c1Q9Z1G3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atp6v1c1Q9Z1G3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atp6v1c1Q9Z1G3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atp6v1c1Q9Z1G3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.71■□□□□ 0.27
Atp6v1c1Q9Z1G3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.71■□□□□ 0.27
Atp6v1c1Q9Z1G3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Atp6v1c1Q9Z1G3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Atp6v1c1Q9Z1G3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atp6v1c1Q9Z1G3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atp6v1c1Q9Z1G3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atp6v1c1Q9Z1G3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atp6v1c1Q9Z1G3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Atp6v1c1Q9Z1G3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atp6v1c1Q9Z1G3 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Atp6v1c1Q9Z1G3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Atp6v1c1Q9Z1G3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
Atp6v1c1Q9Z1G3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Atp6v1c1Q9Z1G3 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Atp6v1c1Q9Z1G3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Atp6v1c1Q9Z1G3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atp6v1c1Q9Z1G3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Atp6v1c1Q9Z1G3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atp6v1c1Q9Z1G3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atp6v1c1Q9Z1G3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atp6v1c1Q9Z1G3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Atp6v1c1Q9Z1G3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.7■□□□□ 0.26
Atp6v1c1Q9Z1G3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atp6v1c1Q9Z1G3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
Atp6v1c1Q9Z1G3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atp6v1c1Q9Z1G3 Gm6365-201ENSMUST00000054711 744 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms