Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.51■□□□□ 0.55
Nr1h3Q9Z0Y9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1h3Q9Z0Y9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1h3Q9Z0Y9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1h3Q9Z0Y9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1h3Q9Z0Y9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1h3Q9Z0Y9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1h3Q9Z0Y9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
Nr1h3Q9Z0Y9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1h3Q9Z0Y9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Nr1h3Q9Z0Y9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nr1h3Q9Z0Y9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Nr1h3Q9Z0Y9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Nr1h3Q9Z0Y9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nr1h3Q9Z0Y9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.5■□□□□ 0.55
Nr1h3Q9Z0Y9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.5■□□□□ 0.55
Nr1h3Q9Z0Y9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nr1h3Q9Z0Y9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
Nr1h3Q9Z0Y9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nr1h3Q9Z0Y9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nr1h3Q9Z0Y9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nr1h3Q9Z0Y9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nr1h3Q9Z0Y9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nr1h3Q9Z0Y9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nr1h3Q9Z0Y9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nr1h3Q9Z0Y9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nr1h3Q9Z0Y9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Nr1h3Q9Z0Y9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nr1h3Q9Z0Y9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nr1h3Q9Z0Y9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Nr1h3Q9Z0Y9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nr1h3Q9Z0Y9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nr1h3Q9Z0Y9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nr1h3Q9Z0Y9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nr1h3Q9Z0Y9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Nr1h3Q9Z0Y9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nr1h3Q9Z0Y9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Nr1h3Q9Z0Y9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nr1h3Q9Z0Y9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Nr1h3Q9Z0Y9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Nr1h3Q9Z0Y9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nr1h3Q9Z0Y9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nr1h3Q9Z0Y9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.49■□□□□ 0.55
Nr1h3Q9Z0Y9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nr1h3Q9Z0Y9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nr1h3Q9Z0Y9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nr1h3Q9Z0Y9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.48■□□□□ 0.55
Nr1h3Q9Z0Y9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nr1h3Q9Z0Y9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nr1h3Q9Z0Y9 Gm17807-201ENSMUST00000186869 298 ntBASIC18.48■□□□□ 0.55
Nr1h3Q9Z0Y9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nr1h3Q9Z0Y9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.48■□□□□ 0.55
Nr1h3Q9Z0Y9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.48■□□□□ 0.55
Nr1h3Q9Z0Y9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nr1h3Q9Z0Y9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.47■□□□□ 0.55
Nr1h3Q9Z0Y9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.47■□□□□ 0.55
Nr1h3Q9Z0Y9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1h3Q9Z0Y9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1h3Q9Z0Y9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1h3Q9Z0Y9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1h3Q9Z0Y9 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.47■□□□□ 0.55
Nr1h3Q9Z0Y9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1h3Q9Z0Y9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Nr1h3Q9Z0Y9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.47■□□□□ 0.55
Nr1h3Q9Z0Y9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1h3Q9Z0Y9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.47■□□□□ 0.55
Nr1h3Q9Z0Y9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1h3Q9Z0Y9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1h3Q9Z0Y9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1h3Q9Z0Y9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Nr1h3Q9Z0Y9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Nr1h3Q9Z0Y9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Nr1h3Q9Z0Y9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1h3Q9Z0Y9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1h3Q9Z0Y9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1h3Q9Z0Y9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Nr1h3Q9Z0Y9 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.46■□□□□ 0.55
Nr1h3Q9Z0Y9 Gm11950-201ENSMUST00000121615 838 ntBASIC18.46■□□□□ 0.55
Nr1h3Q9Z0Y9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.46■□□□□ 0.55
Nr1h3Q9Z0Y9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1h3Q9Z0Y9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1h3Q9Z0Y9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1h3Q9Z0Y9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1h3Q9Z0Y9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1h3Q9Z0Y9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1h3Q9Z0Y9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1h3Q9Z0Y9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1h3Q9Z0Y9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1h3Q9Z0Y9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Nr1h3Q9Z0Y9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1h3Q9Z0Y9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1h3Q9Z0Y9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1h3Q9Z0Y9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1h3Q9Z0Y9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1h3Q9Z0Y9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1h3Q9Z0Y9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.45■□□□□ 0.54
Nr1h3Q9Z0Y9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1h3Q9Z0Y9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.45■□□□□ 0.54
Nr1h3Q9Z0Y9 Gm18958-201ENSMUST00000174258 762 ntBASIC18.45■□□□□ 0.54
Nr1h3Q9Z0Y9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms