Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcb1Q9Z0H3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcb1Q9Z0H3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcb1Q9Z0H3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Smarcb1Q9Z0H3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.68■□□□□ 0.42
Smarcb1Q9Z0H3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcb1Q9Z0H3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Smarcb1Q9Z0H3 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.68■□□□□ 0.42
Smarcb1Q9Z0H3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.68■□□□□ 0.42
Smarcb1Q9Z0H3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcb1Q9Z0H3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcb1Q9Z0H3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcb1Q9Z0H3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.68■□□□□ 0.42
Smarcb1Q9Z0H3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcb1Q9Z0H3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.68■□□□□ 0.42
Smarcb1Q9Z0H3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Smarcb1Q9Z0H3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcb1Q9Z0H3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Smarcb1Q9Z0H3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcb1Q9Z0H3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcb1Q9Z0H3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcb1Q9Z0H3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.67■□□□□ 0.42
Smarcb1Q9Z0H3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.67■□□□□ 0.42
Smarcb1Q9Z0H3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcb1Q9Z0H3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.67■□□□□ 0.42
Smarcb1Q9Z0H3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcb1Q9Z0H3 Gm6623-201ENSMUST00000173570 544 ntBASIC17.67■□□□□ 0.42
Smarcb1Q9Z0H3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcb1Q9Z0H3 Gm45328-201ENSMUST00000210942 917 ntBASIC17.67■□□□□ 0.42
Smarcb1Q9Z0H3 Gm18115-201ENSMUST00000221209 621 ntBASIC17.67■□□□□ 0.42
Smarcb1Q9Z0H3 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcb1Q9Z0H3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcb1Q9Z0H3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcb1Q9Z0H3 Gm10819-201ENSMUST00000099988 561 ntBASIC17.67■□□□□ 0.42
Smarcb1Q9Z0H3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.67■□□□□ 0.42
Smarcb1Q9Z0H3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcb1Q9Z0H3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcb1Q9Z0H3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcb1Q9Z0H3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcb1Q9Z0H3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcb1Q9Z0H3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
Smarcb1Q9Z0H3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcb1Q9Z0H3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcb1Q9Z0H3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcb1Q9Z0H3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcb1Q9Z0H3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcb1Q9Z0H3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcb1Q9Z0H3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Smarcb1Q9Z0H3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcb1Q9Z0H3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcb1Q9Z0H3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcb1Q9Z0H3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Smarcb1Q9Z0H3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Smarcb1Q9Z0H3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcb1Q9Z0H3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcb1Q9Z0H3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcb1Q9Z0H3 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.66■□□□□ 0.42
Smarcb1Q9Z0H3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcb1Q9Z0H3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.65■□□□□ 0.42
Smarcb1Q9Z0H3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Smarcb1Q9Z0H3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcb1Q9Z0H3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcb1Q9Z0H3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcb1Q9Z0H3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcb1Q9Z0H3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcb1Q9Z0H3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcb1Q9Z0H3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcb1Q9Z0H3 Mir770-201ENSMUST00000103252 94 ntBASIC17.65■□□□□ 0.42
Smarcb1Q9Z0H3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.65■□□□□ 0.42
Smarcb1Q9Z0H3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.65■□□□□ 0.42
Smarcb1Q9Z0H3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.65■□□□□ 0.42
Smarcb1Q9Z0H3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcb1Q9Z0H3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcb1Q9Z0H3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcb1Q9Z0H3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.65■□□□□ 0.42
Smarcb1Q9Z0H3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcb1Q9Z0H3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcb1Q9Z0H3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcb1Q9Z0H3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcb1Q9Z0H3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcb1Q9Z0H3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcb1Q9Z0H3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcb1Q9Z0H3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Smarcb1Q9Z0H3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smarcb1Q9Z0H3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.42
Smarcb1Q9Z0H3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smarcb1Q9Z0H3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcb1Q9Z0H3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcb1Q9Z0H3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.64■□□□□ 0.41
Smarcb1Q9Z0H3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcb1Q9Z0H3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcb1Q9Z0H3 Gm11336-201ENSMUST00000118168 334 ntBASIC17.64■□□□□ 0.41
Smarcb1Q9Z0H3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Smarcb1Q9Z0H3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.64■□□□□ 0.41
Smarcb1Q9Z0H3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcb1Q9Z0H3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.64■□□□□ 0.41
Smarcb1Q9Z0H3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcb1Q9Z0H3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcb1Q9Z0H3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcb1Q9Z0H3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms