Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atp6ap1Q9R1Q9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atp6ap1Q9R1Q9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atp6ap1Q9R1Q9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atp6ap1Q9R1Q9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atp6ap1Q9R1Q9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Atp6ap1Q9R1Q9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atp6ap1Q9R1Q9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atp6ap1Q9R1Q9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atp6ap1Q9R1Q9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atp6ap1Q9R1Q9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atp6ap1Q9R1Q9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atp6ap1Q9R1Q9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Atp6ap1Q9R1Q9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atp6ap1Q9R1Q9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atp6ap1Q9R1Q9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atp6ap1Q9R1Q9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Atp6ap1Q9R1Q9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atp6ap1Q9R1Q9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.68■□□□□ 0.26
Atp6ap1Q9R1Q9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Atp6ap1Q9R1Q9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atp6ap1Q9R1Q9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atp6ap1Q9R1Q9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atp6ap1Q9R1Q9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atp6ap1Q9R1Q9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Atp6ap1Q9R1Q9 Gm27463-201ENSMUST00000183569 57 ntBASIC16.68■□□□□ 0.26
Atp6ap1Q9R1Q9 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.68■□□□□ 0.26
Atp6ap1Q9R1Q9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atp6ap1Q9R1Q9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atp6ap1Q9R1Q9 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.68■□□□□ 0.26
Atp6ap1Q9R1Q9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atp6ap1Q9R1Q9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Atp6ap1Q9R1Q9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atp6ap1Q9R1Q9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atp6ap1Q9R1Q9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atp6ap1Q9R1Q9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Atp6ap1Q9R1Q9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Gm10252-201ENSMUST00000209541 832 ntBASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Gm7791-201ENSMUST00000219066 539 ntBASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Il3ra-202ENSMUST00000223589 738 ntBASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atp6ap1Q9R1Q9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Atp6ap1Q9R1Q9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
Atp6ap1Q9R1Q9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atp6ap1Q9R1Q9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.66■□□□□ 0.26
Atp6ap1Q9R1Q9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Atp6ap1Q9R1Q9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Atp6ap1Q9R1Q9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atp6ap1Q9R1Q9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atp6ap1Q9R1Q9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.66■□□□□ 0.26
Atp6ap1Q9R1Q9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atp6ap1Q9R1Q9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atp6ap1Q9R1Q9 Gm30025-201ENSMUST00000218555 728 ntBASIC16.66■□□□□ 0.26
Atp6ap1Q9R1Q9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.66■□□□□ 0.26
Atp6ap1Q9R1Q9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atp6ap1Q9R1Q9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atp6ap1Q9R1Q9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atp6ap1Q9R1Q9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atp6ap1Q9R1Q9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atp6ap1Q9R1Q9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atp6ap1Q9R1Q9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6ap1Q9R1Q9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Atp6ap1Q9R1Q9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6ap1Q9R1Q9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6ap1Q9R1Q9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6ap1Q9R1Q9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6ap1Q9R1Q9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6ap1Q9R1Q9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Atp6ap1Q9R1Q9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Atp6ap1Q9R1Q9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Atp6ap1Q9R1Q9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6ap1Q9R1Q9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6ap1Q9R1Q9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Atp6ap1Q9R1Q9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6ap1Q9R1Q9 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.65■□□□□ 0.26
Atp6ap1Q9R1Q9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms