Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn2Q9R0A1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn2Q9R0A1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn2Q9R0A1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn2Q9R0A1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn2Q9R0A1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn2Q9R0A1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn2Q9R0A1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn2Q9R0A1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn2Q9R0A1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Clcn2Q9R0A1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn2Q9R0A1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn2Q9R0A1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Clcn2Q9R0A1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Clcn2Q9R0A1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn2Q9R0A1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn2Q9R0A1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn2Q9R0A1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn2Q9R0A1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn2Q9R0A1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn2Q9R0A1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn2Q9R0A1 Gm37292-201ENSMUST00000192062 758 ntBASIC17.41■□□□□ 0.38
Clcn2Q9R0A1 Gm42545-201ENSMUST00000202755 922 ntBASIC17.41■□□□□ 0.38
Clcn2Q9R0A1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn2Q9R0A1 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.41■□□□□ 0.38
Clcn2Q9R0A1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn2Q9R0A1 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn2Q9R0A1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Clcn2Q9R0A1 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn2Q9R0A1 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn2Q9R0A1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Clcn2Q9R0A1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn2Q9R0A1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn2Q9R0A1 Gm43183-201ENSMUST00000200632 547 ntBASIC17.4■□□□□ 0.38
Clcn2Q9R0A1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.4■□□□□ 0.38
Clcn2Q9R0A1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn2Q9R0A1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Clcn2Q9R0A1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Clcn2Q9R0A1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn2Q9R0A1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn2Q9R0A1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Clcn2Q9R0A1 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn2Q9R0A1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn2Q9R0A1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn2Q9R0A1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn2Q9R0A1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Clcn2Q9R0A1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Clcn2Q9R0A1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
Clcn2Q9R0A1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.39■□□□□ 0.38
Clcn2Q9R0A1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn2Q9R0A1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn2Q9R0A1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn2Q9R0A1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn2Q9R0A1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn2Q9R0A1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn2Q9R0A1 Gm10418-201ENSMUST00000100943 576 ntBASIC17.39■□□□□ 0.37
Clcn2Q9R0A1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn2Q9R0A1 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.39■□□□□ 0.37
Clcn2Q9R0A1 Gm10252-201ENSMUST00000209541 832 ntBASIC17.39■□□□□ 0.37
Clcn2Q9R0A1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Clcn2Q9R0A1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Clcn2Q9R0A1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn2Q9R0A1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn2Q9R0A1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Clcn2Q9R0A1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn2Q9R0A1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn2Q9R0A1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn2Q9R0A1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.39■□□□□ 0.37
Clcn2Q9R0A1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn2Q9R0A1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn2Q9R0A1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn2Q9R0A1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn2Q9R0A1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn2Q9R0A1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn2Q9R0A1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn2Q9R0A1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn2Q9R0A1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn2Q9R0A1 Mir1199-201ENSMUST00000117015 119 ntBASIC17.38■□□□□ 0.37
Clcn2Q9R0A1 Gm13401-201ENSMUST00000117074 291 ntBASIC17.38■□□□□ 0.37
Clcn2Q9R0A1 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.38■□□□□ 0.37
Clcn2Q9R0A1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn2Q9R0A1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn2Q9R0A1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn2Q9R0A1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn2Q9R0A1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn2Q9R0A1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn2Q9R0A1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Clcn2Q9R0A1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn2Q9R0A1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn2Q9R0A1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn2Q9R0A1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn2Q9R0A1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn2Q9R0A1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn2Q9R0A1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn2Q9R0A1 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.37■□□□□ 0.37
Clcn2Q9R0A1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn2Q9R0A1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Clcn2Q9R0A1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn2Q9R0A1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn2Q9R0A1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms