Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Nubp1Q9R060 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nubp1Q9R060 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nubp1Q9R060 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nubp1Q9R060 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nubp1Q9R060 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nubp1Q9R060 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nubp1Q9R060 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nubp1Q9R060 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nubp1Q9R060 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nubp1Q9R060 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nubp1Q9R060 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nubp1Q9R060 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.89□□□□□ -0.03
Nubp1Q9R060 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC14.89□□□□□ -0.03
Nubp1Q9R060 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.89□□□□□ -0.03
Nubp1Q9R060 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nubp1Q9R060 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.89□□□□□ -0.03
Nubp1Q9R060 Gm18733-201ENSMUST00000173950 856 ntBASIC14.89□□□□□ -0.03
Nubp1Q9R060 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.89□□□□□ -0.03
Nubp1Q9R060 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.89□□□□□ -0.03
Nubp1Q9R060 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nubp1Q9R060 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nubp1Q9R060 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nubp1Q9R060 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Nubp1Q9R060 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nubp1Q9R060 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nubp1Q9R060 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nubp1Q9R060 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.88□□□□□ -0.03
Nubp1Q9R060 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nubp1Q9R060 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nubp1Q9R060 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nubp1Q9R060 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nubp1Q9R060 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nubp1Q9R060 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nubp1Q9R060 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nubp1Q9R060 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nubp1Q9R060 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nubp1Q9R060 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nubp1Q9R060 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nubp1Q9R060 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.88□□□□□ -0.03
Nubp1Q9R060 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.88□□□□□ -0.03
Nubp1Q9R060 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nubp1Q9R060 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nubp1Q9R060 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nubp1Q9R060 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.88□□□□□ -0.03
Nubp1Q9R060 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nubp1Q9R060 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nubp1Q9R060 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nubp1Q9R060 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.88□□□□□ -0.03
Nubp1Q9R060 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.88□□□□□ -0.03
Nubp1Q9R060 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nubp1Q9R060 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nubp1Q9R060 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Nubp1Q9R060 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nubp1Q9R060 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.87□□□□□ -0.03
Nubp1Q9R060 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Nubp1Q9R060 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nubp1Q9R060 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nubp1Q9R060 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.87□□□□□ -0.03
Nubp1Q9R060 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.87□□□□□ -0.03
Nubp1Q9R060 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
Nubp1Q9R060 Gm37935-201ENSMUST00000192012 982 ntBASIC14.87□□□□□ -0.03
Nubp1Q9R060 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC14.87□□□□□ -0.03
Nubp1Q9R060 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.87□□□□□ -0.03
Nubp1Q9R060 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Nubp1Q9R060 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nubp1Q9R060 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nubp1Q9R060 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nubp1Q9R060 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nubp1Q9R060 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nubp1Q9R060 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nubp1Q9R060 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.87□□□□□ -0.03
Nubp1Q9R060 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nubp1Q9R060 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nubp1Q9R060 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nubp1Q9R060 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nubp1Q9R060 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nubp1Q9R060 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Nubp1Q9R060 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nubp1Q9R060 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nubp1Q9R060 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nubp1Q9R060 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.86□□□□□ -0.03
Nubp1Q9R060 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Nubp1Q9R060 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nubp1Q9R060 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nubp1Q9R060 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.86□□□□□ -0.03
Nubp1Q9R060 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Nubp1Q9R060 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Nubp1Q9R060 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nubp1Q9R060 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Nubp1Q9R060 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nubp1Q9R060 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nubp1Q9R060 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nubp1Q9R060 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nubp1Q9R060 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.86□□□□□ -0.03
Nubp1Q9R060 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nubp1Q9R060 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nubp1Q9R060 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.85□□□□□ -0.03
Nubp1Q9R060 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Nubp1Q9R060 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms