Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh5Q9QUM7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.41■□□□□ 0.38
Msh5Q9QUM7 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.41■□□□□ 0.38
Msh5Q9QUM7 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC17.41■□□□□ 0.38
Msh5Q9QUM7 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC17.41■□□□□ 0.38
Msh5Q9QUM7 AC153937.1-201ENSMUST00000218734 412 ntBASIC17.41■□□□□ 0.38
Msh5Q9QUM7 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.41■□□□□ 0.38
Msh5Q9QUM7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Msh5Q9QUM7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh5Q9QUM7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Msh5Q9QUM7 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh5Q9QUM7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh5Q9QUM7 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh5Q9QUM7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.41■□□□□ 0.38
Msh5Q9QUM7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh5Q9QUM7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh5Q9QUM7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Msh5Q9QUM7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Msh5Q9QUM7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Msh5Q9QUM7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh5Q9QUM7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Msh5Q9QUM7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh5Q9QUM7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Msh5Q9QUM7 Gm13168-201ENSMUST00000121771 632 ntBASIC17.4■□□□□ 0.38
Msh5Q9QUM7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh5Q9QUM7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh5Q9QUM7 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Msh5Q9QUM7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh5Q9QUM7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh5Q9QUM7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.4■□□□□ 0.38
Msh5Q9QUM7 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.4■□□□□ 0.38
Msh5Q9QUM7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Msh5Q9QUM7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh5Q9QUM7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.39■□□□□ 0.37
Msh5Q9QUM7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh5Q9QUM7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh5Q9QUM7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Msh5Q9QUM7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh5Q9QUM7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh5Q9QUM7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh5Q9QUM7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.39■□□□□ 0.37
Msh5Q9QUM7 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Msh5Q9QUM7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Msh5Q9QUM7 Mir6349-201ENSMUST00000184059 97 ntBASIC17.39■□□□□ 0.37
Msh5Q9QUM7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.39■□□□□ 0.37
Msh5Q9QUM7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh5Q9QUM7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh5Q9QUM7 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.39■□□□□ 0.37
Msh5Q9QUM7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh5Q9QUM7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Msh5Q9QUM7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh5Q9QUM7 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh5Q9QUM7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh5Q9QUM7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.38■□□□□ 0.37
Msh5Q9QUM7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Msh5Q9QUM7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Msh5Q9QUM7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.38■□□□□ 0.37
Msh5Q9QUM7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Msh5Q9QUM7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Msh5Q9QUM7 Thoc7-209ENSMUST00000225325 765 ntBASIC17.38■□□□□ 0.37
Msh5Q9QUM7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Msh5Q9QUM7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Msh5Q9QUM7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Msh5Q9QUM7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Msh5Q9QUM7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Msh5Q9QUM7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Msh5Q9QUM7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Msh5Q9QUM7 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.38■□□□□ 0.37
Msh5Q9QUM7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Msh5Q9QUM7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh5Q9QUM7 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.37■□□□□ 0.37
Msh5Q9QUM7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Msh5Q9QUM7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Msh5Q9QUM7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh5Q9QUM7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh5Q9QUM7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.37■□□□□ 0.37
Msh5Q9QUM7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.37■□□□□ 0.37
Msh5Q9QUM7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh5Q9QUM7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh5Q9QUM7 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Msh5Q9QUM7 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.37■□□□□ 0.37
Msh5Q9QUM7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh5Q9QUM7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh5Q9QUM7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh5Q9QUM7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh5Q9QUM7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Msh5Q9QUM7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.36■□□□□ 0.37
Msh5Q9QUM7 Gm11643-201ENSMUST00000119578 864 ntBASIC17.36■□□□□ 0.37
Msh5Q9QUM7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.36■□□□□ 0.37
Msh5Q9QUM7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh5Q9QUM7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Msh5Q9QUM7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Msh5Q9QUM7 Gm8520-201ENSMUST00000186517 868 ntBASIC17.36■□□□□ 0.37
Msh5Q9QUM7 Gm42545-201ENSMUST00000202755 922 ntBASIC17.36■□□□□ 0.37
Msh5Q9QUM7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh5Q9QUM7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Msh5Q9QUM7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh5Q9QUM7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Msh5Q9QUM7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh5Q9QUM7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms