Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Trem3Q9JKE1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trem3Q9JKE1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trem3Q9JKE1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trem3Q9JKE1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.81□□□□□ -0.2
Trem3Q9JKE1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trem3Q9JKE1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.81□□□□□ -0.2
Trem3Q9JKE1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.81□□□□□ -0.2
Trem3Q9JKE1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.81□□□□□ -0.2
Trem3Q9JKE1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trem3Q9JKE1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trem3Q9JKE1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trem3Q9JKE1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trem3Q9JKE1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trem3Q9JKE1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trem3Q9JKE1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trem3Q9JKE1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.81□□□□□ -0.2
Trem3Q9JKE1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trem3Q9JKE1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.81□□□□□ -0.2
Trem3Q9JKE1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trem3Q9JKE1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trem3Q9JKE1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trem3Q9JKE1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem3Q9JKE1 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.8□□□□□ -0.2
Trem3Q9JKE1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem3Q9JKE1 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.8□□□□□ -0.2
Trem3Q9JKE1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem3Q9JKE1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.8□□□□□ -0.2
Trem3Q9JKE1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trem3Q9JKE1 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem3Q9JKE1 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trem3Q9JKE1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem3Q9JKE1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem3Q9JKE1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.8□□□□□ -0.2
Trem3Q9JKE1 Gm10138-203ENSMUST00000206952 366 ntBASIC13.8□□□□□ -0.2
Trem3Q9JKE1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Trem3Q9JKE1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem3Q9JKE1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trem3Q9JKE1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem3Q9JKE1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem3Q9JKE1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trem3Q9JKE1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trem3Q9JKE1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem3Q9JKE1 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.8□□□□□ -0.2
Trem3Q9JKE1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trem3Q9JKE1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem3Q9JKE1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem3Q9JKE1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem3Q9JKE1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem3Q9JKE1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem3Q9JKE1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem3Q9JKE1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem3Q9JKE1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem3Q9JKE1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem3Q9JKE1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.79□□□□□ -0.2
Trem3Q9JKE1 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem3Q9JKE1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem3Q9JKE1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem3Q9JKE1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem3Q9JKE1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.79□□□□□ -0.2
Trem3Q9JKE1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem3Q9JKE1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.79□□□□□ -0.2
Trem3Q9JKE1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem3Q9JKE1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem3Q9JKE1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem3Q9JKE1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem3Q9JKE1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem3Q9JKE1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Trem3Q9JKE1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem3Q9JKE1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trem3Q9JKE1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem3Q9JKE1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem3Q9JKE1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trem3Q9JKE1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem3Q9JKE1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trem3Q9JKE1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trem3Q9JKE1 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trem3Q9JKE1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trem3Q9JKE1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trem3Q9JKE1 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.78□□□□□ -0.2
Trem3Q9JKE1 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.78□□□□□ -0.2
Trem3Q9JKE1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Trem3Q9JKE1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trem3Q9JKE1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trem3Q9JKE1 Gm6576-201ENSMUST00000169678 883 ntBASIC13.78□□□□□ -0.2
Trem3Q9JKE1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trem3Q9JKE1 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.78□□□□□ -0.2
Trem3Q9JKE1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Trem3Q9JKE1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trem3Q9JKE1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trem3Q9JKE1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trem3Q9JKE1 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trem3Q9JKE1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trem3Q9JKE1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trem3Q9JKE1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trem3Q9JKE1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trem3Q9JKE1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trem3Q9JKE1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trem3Q9JKE1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trem3Q9JKE1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms