Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn5aQ9JJV9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.6■□□□□ 0.41
Scn5aQ9JJV9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn5aQ9JJV9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn5aQ9JJV9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn5aQ9JJV9 Gm15372-201ENSMUST00000120729 834 ntBASIC17.6■□□□□ 0.41
Scn5aQ9JJV9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.6■□□□□ 0.41
Scn5aQ9JJV9 Rps4l-201ENSMUST00000071745 943 ntBASIC17.6■□□□□ 0.41
Scn5aQ9JJV9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn5aQ9JJV9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.6■□□□□ 0.41
Scn5aQ9JJV9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Scn5aQ9JJV9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn5aQ9JJV9 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.6■□□□□ 0.41
Scn5aQ9JJV9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn5aQ9JJV9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Scn5aQ9JJV9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn5aQ9JJV9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn5aQ9JJV9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.59■□□□□ 0.41
Scn5aQ9JJV9 Mir5126-201ENSMUST00000175513 77 ntBASIC17.59■□□□□ 0.41
Scn5aQ9JJV9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn5aQ9JJV9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Scn5aQ9JJV9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn5aQ9JJV9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn5aQ9JJV9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn5aQ9JJV9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn5aQ9JJV9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn5aQ9JJV9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn5aQ9JJV9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn5aQ9JJV9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn5aQ9JJV9 Gm10052-201ENSMUST00000168019 960 ntBASIC17.59■□□□□ 0.41
Scn5aQ9JJV9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.59■□□□□ 0.41
Scn5aQ9JJV9 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.59■□□□□ 0.41
Scn5aQ9JJV9 Gm7729-201ENSMUST00000050143 801 ntBASIC17.59■□□□□ 0.41
Scn5aQ9JJV9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
Scn5aQ9JJV9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn5aQ9JJV9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Scn5aQ9JJV9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn5aQ9JJV9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.58■□□□□ 0.4
Scn5aQ9JJV9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn5aQ9JJV9 Rprl3-201ENSMUST00000157400 290 ntBASIC17.58■□□□□ 0.4
Scn5aQ9JJV9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Scn5aQ9JJV9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn5aQ9JJV9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Scn5aQ9JJV9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn5aQ9JJV9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.58■□□□□ 0.4
Scn5aQ9JJV9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.58■□□□□ 0.4
Scn5aQ9JJV9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.58■□□□□ 0.4
Scn5aQ9JJV9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn5aQ9JJV9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scn5aQ9JJV9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scn5aQ9JJV9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn5aQ9JJV9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.57■□□□□ 0.4
Scn5aQ9JJV9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn5aQ9JJV9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn5aQ9JJV9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scn5aQ9JJV9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.57■□□□□ 0.4
Scn5aQ9JJV9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.57■□□□□ 0.4
Scn5aQ9JJV9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.57■□□□□ 0.4
Scn5aQ9JJV9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn5aQ9JJV9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Scn5aQ9JJV9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn5aQ9JJV9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn5aQ9JJV9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scn5aQ9JJV9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Scn5aQ9JJV9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Scn5aQ9JJV9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn5aQ9JJV9 Gm18206-201ENSMUST00000207027 926 ntBASIC17.56■□□□□ 0.4
Scn5aQ9JJV9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn5aQ9JJV9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Scn5aQ9JJV9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn5aQ9JJV9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn5aQ9JJV9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
Scn5aQ9JJV9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn5aQ9JJV9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Scn5aQ9JJV9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Scn5aQ9JJV9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn5aQ9JJV9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn5aQ9JJV9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.56■□□□□ 0.4
Scn5aQ9JJV9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scn5aQ9JJV9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn5aQ9JJV9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.55■□□□□ 0.4
Scn5aQ9JJV9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn5aQ9JJV9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scn5aQ9JJV9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn5aQ9JJV9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn5aQ9JJV9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scn5aQ9JJV9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scn5aQ9JJV9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scn5aQ9JJV9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn5aQ9JJV9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn5aQ9JJV9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn5aQ9JJV9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn5aQ9JJV9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn5aQ9JJV9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn5aQ9JJV9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.55■□□□□ 0.4
Scn5aQ9JJV9 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.55■□□□□ 0.4
Scn5aQ9JJV9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.55■□□□□ 0.4
Scn5aQ9JJV9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.55■□□□□ 0.4
Scn5aQ9JJV9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.55■□□□□ 0.4
Scn5aQ9JJV9 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms