Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ush1cQ9ES64 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.58■□□□□ 0.72
Ush1cQ9ES64 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.58■□□□□ 0.72
Ush1cQ9ES64 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.58■□□□□ 0.72
Ush1cQ9ES64 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Ush1cQ9ES64 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ush1cQ9ES64 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ush1cQ9ES64 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Ush1cQ9ES64 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ush1cQ9ES64 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ush1cQ9ES64 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ush1cQ9ES64 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ush1cQ9ES64 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.58■□□□□ 0.72
Ush1cQ9ES64 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ush1cQ9ES64 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ush1cQ9ES64 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Ush1cQ9ES64 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Ush1cQ9ES64 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ush1cQ9ES64 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC19.57■□□□□ 0.72
Ush1cQ9ES64 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ush1cQ9ES64 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ush1cQ9ES64 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ush1cQ9ES64 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.57■□□□□ 0.72
Ush1cQ9ES64 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.57■□□□□ 0.72
Ush1cQ9ES64 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ush1cQ9ES64 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ush1cQ9ES64 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ush1cQ9ES64 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ush1cQ9ES64 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ush1cQ9ES64 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Ush1cQ9ES64 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ush1cQ9ES64 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ush1cQ9ES64 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ush1cQ9ES64 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ush1cQ9ES64 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ush1cQ9ES64 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ush1cQ9ES64 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ush1cQ9ES64 Gm13534-201ENSMUST00000121169 513 ntBASIC19.56■□□□□ 0.72
Ush1cQ9ES64 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ush1cQ9ES64 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ush1cQ9ES64 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ush1cQ9ES64 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ush1cQ9ES64 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ush1cQ9ES64 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ush1cQ9ES64 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ush1cQ9ES64 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
Ush1cQ9ES64 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ush1cQ9ES64 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ush1cQ9ES64 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ush1cQ9ES64 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ush1cQ9ES64 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.55■□□□□ 0.72
Ush1cQ9ES64 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ush1cQ9ES64 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ush1cQ9ES64 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ush1cQ9ES64 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ush1cQ9ES64 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ush1cQ9ES64 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ush1cQ9ES64 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Ush1cQ9ES64 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ush1cQ9ES64 Reep4-203ENSMUST00000226563 1444 ntBASIC19.55■□□□□ 0.72
Ush1cQ9ES64 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ush1cQ9ES64 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.55■□□□□ 0.72
Ush1cQ9ES64 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Ush1cQ9ES64 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ush1cQ9ES64 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ush1cQ9ES64 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ush1cQ9ES64 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ush1cQ9ES64 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ush1cQ9ES64 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ush1cQ9ES64 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Ush1cQ9ES64 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ush1cQ9ES64 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ush1cQ9ES64 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ush1cQ9ES64 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ush1cQ9ES64 Gm13234-201ENSMUST00000120010 747 ntBASIC19.54■□□□□ 0.72
Ush1cQ9ES64 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ush1cQ9ES64 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.54■□□□□ 0.72
Ush1cQ9ES64 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.54■□□□□ 0.72
Ush1cQ9ES64 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ush1cQ9ES64 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ush1cQ9ES64 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Ush1cQ9ES64 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ush1cQ9ES64 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.54■□□□□ 0.72
Ush1cQ9ES64 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ush1cQ9ES64 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ush1cQ9ES64 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ush1cQ9ES64 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ush1cQ9ES64 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ush1cQ9ES64 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ush1cQ9ES64 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ush1cQ9ES64 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ush1cQ9ES64 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ush1cQ9ES64 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ush1cQ9ES64 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ush1cQ9ES64 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ush1cQ9ES64 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ush1cQ9ES64 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC19.53■□□□□ 0.72
Ush1cQ9ES64 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ush1cQ9ES64 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ush1cQ9ES64 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms