Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Cpsf1Q9EPU4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Cpsf1Q9EPU4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Cpsf1Q9EPU4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Cpsf1Q9EPU4 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Cpsf1Q9EPU4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC23.57■■□□□ 1.36
Cpsf1Q9EPU4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Cpsf1Q9EPU4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Cpsf1Q9EPU4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cpsf1Q9EPU4 Zfp264-201ENSMUST00000208656 1563 ntBASIC23.56■■□□□ 1.36
Cpsf1Q9EPU4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cpsf1Q9EPU4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Cpsf1Q9EPU4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Cpsf1Q9EPU4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC23.56■■□□□ 1.36
Cpsf1Q9EPU4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Cpsf1Q9EPU4 Gm17807-201ENSMUST00000186869 298 ntBASIC23.56■■□□□ 1.36
Cpsf1Q9EPU4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cpsf1Q9EPU4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cpsf1Q9EPU4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC23.56■■□□□ 1.36
Cpsf1Q9EPU4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Cpsf1Q9EPU4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Cpsf1Q9EPU4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Cpsf1Q9EPU4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Cpsf1Q9EPU4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Cpsf1Q9EPU4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Cpsf1Q9EPU4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Cpsf1Q9EPU4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Cpsf1Q9EPU4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Cpsf1Q9EPU4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC23.55■■□□□ 1.36
Cpsf1Q9EPU4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Cpsf1Q9EPU4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Cpsf1Q9EPU4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Cpsf1Q9EPU4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
Cpsf1Q9EPU4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Cpsf1Q9EPU4 Gm29707-201ENSMUST00000196325 491 ntBASIC23.54■■□□□ 1.36
Cpsf1Q9EPU4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Cpsf1Q9EPU4 Gm45606-201ENSMUST00000209836 2795 ntBASIC23.54■■□□□ 1.36
Cpsf1Q9EPU4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Cpsf1Q9EPU4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Cpsf1Q9EPU4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Cpsf1Q9EPU4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC23.53■■□□□ 1.36
Cpsf1Q9EPU4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC23.53■■□□□ 1.36
Cpsf1Q9EPU4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
Cpsf1Q9EPU4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Cpsf1Q9EPU4 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Cpsf1Q9EPU4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC23.53■■□□□ 1.36
Cpsf1Q9EPU4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Cpsf1Q9EPU4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Cpsf1Q9EPU4 Gfra2-202ENSMUST00000227633 1480 ntBASIC23.53■■□□□ 1.36
Cpsf1Q9EPU4 Gm6598-201ENSMUST00000202719 2615 ntBASIC23.52■■□□□ 1.36
Cpsf1Q9EPU4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC23.52■■□□□ 1.36
Cpsf1Q9EPU4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC23.52■■□□□ 1.36
Cpsf1Q9EPU4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Cpsf1Q9EPU4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Cpsf1Q9EPU4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Cpsf1Q9EPU4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Cpsf1Q9EPU4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC23.52■■□□□ 1.36
Cpsf1Q9EPU4 Gm45203-201ENSMUST00000206384 1831 ntBASIC23.52■■□□□ 1.36
Cpsf1Q9EPU4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
Cpsf1Q9EPU4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Cpsf1Q9EPU4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Cpsf1Q9EPU4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Cpsf1Q9EPU4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Cpsf1Q9EPU4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Cpsf1Q9EPU4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Cpsf1Q9EPU4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Cpsf1Q9EPU4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC23.51■■□□□ 1.35
Cpsf1Q9EPU4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
Cpsf1Q9EPU4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cpsf1Q9EPU4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cpsf1Q9EPU4 Gm27742-201ENSMUST00000184667 60 ntBASIC23.5■■□□□ 1.35
Cpsf1Q9EPU4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC23.5■■□□□ 1.35
Cpsf1Q9EPU4 AC125350.1-201ENSMUST00000225115 903 ntBASIC23.5■■□□□ 1.35
Cpsf1Q9EPU4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cpsf1Q9EPU4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
Cpsf1Q9EPU4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Cpsf1Q9EPU4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cpsf1Q9EPU4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cpsf1Q9EPU4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cpsf1Q9EPU4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cpsf1Q9EPU4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Cpsf1Q9EPU4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC23.5■■□□□ 1.35
Cpsf1Q9EPU4 Otx2os1-206ENSMUST00000228153 787 ntBASIC23.5■■□□□ 1.35
Cpsf1Q9EPU4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cpsf1Q9EPU4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC23.49■■□□□ 1.35
Cpsf1Q9EPU4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Cpsf1Q9EPU4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Cpsf1Q9EPU4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Cpsf1Q9EPU4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Cpsf1Q9EPU4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Cpsf1Q9EPU4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Cpsf1Q9EPU4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Cpsf1Q9EPU4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Cpsf1Q9EPU4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Cpsf1Q9EPU4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Cpsf1Q9EPU4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Cpsf1Q9EPU4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Cpsf1Q9EPU4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Cpsf1Q9EPU4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Cpsf1Q9EPU4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms