Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ssmem1Q9D9Y8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ssmem1Q9D9Y8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ssmem1Q9D9Y8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ssmem1Q9D9Y8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.72□□□□□ -0.05
Ssmem1Q9D9Y8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ssmem1Q9D9Y8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ssmem1Q9D9Y8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ssmem1Q9D9Y8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ssmem1Q9D9Y8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ssmem1Q9D9Y8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ssmem1Q9D9Y8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ssmem1Q9D9Y8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ssmem1Q9D9Y8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ssmem1Q9D9Y8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ssmem1Q9D9Y8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ssmem1Q9D9Y8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Ssmem1Q9D9Y8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ssmem1Q9D9Y8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Ssmem1Q9D9Y8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ssmem1Q9D9Y8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.71□□□□□ -0.05
Ssmem1Q9D9Y8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ssmem1Q9D9Y8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ssmem1Q9D9Y8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ssmem1Q9D9Y8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ssmem1Q9D9Y8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ssmem1Q9D9Y8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ssmem1Q9D9Y8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ssmem1Q9D9Y8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ssmem1Q9D9Y8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.71□□□□□ -0.05
Ssmem1Q9D9Y8 Gm18958-201ENSMUST00000174258 762 ntBASIC14.71□□□□□ -0.05
Ssmem1Q9D9Y8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ssmem1Q9D9Y8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ssmem1Q9D9Y8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Ssmem1Q9D9Y8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ssmem1Q9D9Y8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ssmem1Q9D9Y8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ssmem1Q9D9Y8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ssmem1Q9D9Y8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ssmem1Q9D9Y8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ssmem1Q9D9Y8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.71□□□□□ -0.06
Ssmem1Q9D9Y8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 Gm7370-201ENSMUST00000219471 767 ntBASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Ssmem1Q9D9Y8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms