Protein–RNA interactions for Protein: Q9D968

Hcfc2, Host cell factor 2, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc2Q9D968 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc2Q9D968 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc2Q9D968 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc2Q9D968 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc2Q9D968 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc2Q9D968 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc2Q9D968 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc2Q9D968 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Hcfc2Q9D968 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.01□□□□□ -0.33
Hcfc2Q9D968 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc2Q9D968 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.01□□□□□ -0.33
Hcfc2Q9D968 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.01□□□□□ -0.33
Hcfc2Q9D968 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Hcfc2Q9D968 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Hcfc2Q9D968 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Hcfc2Q9D968 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13□□□□□ -0.33
Hcfc2Q9D968 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13□□□□□ -0.33
Hcfc2Q9D968 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13□□□□□ -0.33
Hcfc2Q9D968 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Hcfc2Q9D968 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Hcfc2Q9D968 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13□□□□□ -0.33
Hcfc2Q9D968 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Hcfc2Q9D968 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc2Q9D968 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc2Q9D968 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.99□□□□□ -0.33
Hcfc2Q9D968 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc2Q9D968 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Hcfc2Q9D968 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc2Q9D968 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc2Q9D968 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc2Q9D968 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc2Q9D968 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc2Q9D968 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc2Q9D968 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Hcfc2Q9D968 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.99□□□□□ -0.33
Hcfc2Q9D968 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc2Q9D968 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Hcfc2Q9D968 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc2Q9D968 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc2Q9D968 Gm2011-201ENSMUST00000203124 1263 ntBASIC12.99□□□□□ -0.33
Hcfc2Q9D968 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc2Q9D968 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Hcfc2Q9D968 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Hcfc2Q9D968 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Hcfc2Q9D968 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc2Q9D968 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.99□□□□□ -0.33
Hcfc2Q9D968 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Hcfc2Q9D968 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc2Q9D968 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc2Q9D968 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc2Q9D968 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc2Q9D968 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc2Q9D968 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc2Q9D968 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC12.98□□□□□ -0.33
Hcfc2Q9D968 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc2Q9D968 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Hcfc2Q9D968 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.98□□□□□ -0.33
Hcfc2Q9D968 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc2Q9D968 Gm10418-201ENSMUST00000100943 576 ntBASIC12.98□□□□□ -0.33
Hcfc2Q9D968 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Hcfc2Q9D968 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc2Q9D968 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc2Q9D968 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Hcfc2Q9D968 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc2Q9D968 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc2Q9D968 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc2Q9D968 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc2Q9D968 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc2Q9D968 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms