Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gtf3c6Q9D8P7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gtf3c6Q9D8P7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Gtf3c6Q9D8P7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gtf3c6Q9D8P7 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.2■□□□□ 0.5
Gtf3c6Q9D8P7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gtf3c6Q9D8P7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Gtf3c6Q9D8P7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gtf3c6Q9D8P7 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Gtf3c6Q9D8P7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gtf3c6Q9D8P7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gtf3c6Q9D8P7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gtf3c6Q9D8P7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gtf3c6Q9D8P7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gtf3c6Q9D8P7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gtf3c6Q9D8P7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gtf3c6Q9D8P7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gtf3c6Q9D8P7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gtf3c6Q9D8P7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gtf3c6Q9D8P7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Gtf3c6Q9D8P7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gtf3c6Q9D8P7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gtf3c6Q9D8P7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gtf3c6Q9D8P7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gtf3c6Q9D8P7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gtf3c6Q9D8P7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.19■□□□□ 0.5
Gtf3c6Q9D8P7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gtf3c6Q9D8P7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gtf3c6Q9D8P7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Gtf3c6Q9D8P7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.19■□□□□ 0.5
Gtf3c6Q9D8P7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gtf3c6Q9D8P7 Timm23-208ENSMUST00000226683 750 ntBASIC18.19■□□□□ 0.5
Gtf3c6Q9D8P7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gtf3c6Q9D8P7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Gtf3c6Q9D8P7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Gtf3c6Q9D8P7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gtf3c6Q9D8P7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Gtf3c6Q9D8P7 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gtf3c6Q9D8P7 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gtf3c6Q9D8P7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gtf3c6Q9D8P7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gtf3c6Q9D8P7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.19■□□□□ 0.5
Gtf3c6Q9D8P7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gtf3c6Q9D8P7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Gtf3c6Q9D8P7 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.19■□□□□ 0.5
Gtf3c6Q9D8P7 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gtf3c6Q9D8P7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gtf3c6Q9D8P7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gtf3c6Q9D8P7 Gm12085-201ENSMUST00000119263 940 ntBASIC18.18■□□□□ 0.5
Gtf3c6Q9D8P7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.18■□□□□ 0.5
Gtf3c6Q9D8P7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gtf3c6Q9D8P7 Il3ra-202ENSMUST00000223589 738 ntBASIC18.18■□□□□ 0.5
Gtf3c6Q9D8P7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gtf3c6Q9D8P7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gtf3c6Q9D8P7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gtf3c6Q9D8P7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gtf3c6Q9D8P7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Gtf3c6Q9D8P7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gtf3c6Q9D8P7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gtf3c6Q9D8P7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gtf3c6Q9D8P7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gtf3c6Q9D8P7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.17■□□□□ 0.5
Gtf3c6Q9D8P7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gtf3c6Q9D8P7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Gtf3c6Q9D8P7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gtf3c6Q9D8P7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gtf3c6Q9D8P7 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.17■□□□□ 0.5
Gtf3c6Q9D8P7 Gm7638-201ENSMUST00000121348 967 ntBASIC18.17■□□□□ 0.5
Gtf3c6Q9D8P7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gtf3c6Q9D8P7 Odf3b-204ENSMUST00000227834 930 ntBASIC18.17■□□□□ 0.5
Gtf3c6Q9D8P7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gtf3c6Q9D8P7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gtf3c6Q9D8P7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gtf3c6Q9D8P7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gtf3c6Q9D8P7 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.17■□□□□ 0.5
Gtf3c6Q9D8P7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gtf3c6Q9D8P7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gtf3c6Q9D8P7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gtf3c6Q9D8P7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Gtf3c6Q9D8P7 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gtf3c6Q9D8P7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Gtf3c6Q9D8P7 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gtf3c6Q9D8P7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gtf3c6Q9D8P7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gtf3c6Q9D8P7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gtf3c6Q9D8P7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.16■□□□□ 0.5
Gtf3c6Q9D8P7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gtf3c6Q9D8P7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.16■□□□□ 0.5
Gtf3c6Q9D8P7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.16■□□□□ 0.5
Gtf3c6Q9D8P7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gtf3c6Q9D8P7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gtf3c6Q9D8P7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Gtf3c6Q9D8P7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gtf3c6Q9D8P7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gtf3c6Q9D8P7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gtf3c6Q9D8P7 Gm715-201ENSMUST00000117865 831 ntBASIC18.15■□□□□ 0.5
Gtf3c6Q9D8P7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.15■□□□□ 0.5
Gtf3c6Q9D8P7 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.15■□□□□ 0.5
Gtf3c6Q9D8P7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gtf3c6Q9D8P7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms