Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nop56Q9D6Z1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nop56Q9D6Z1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nop56Q9D6Z1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nop56Q9D6Z1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nop56Q9D6Z1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nop56Q9D6Z1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nop56Q9D6Z1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nop56Q9D6Z1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nop56Q9D6Z1 Gm2399-201ENSMUST00000104944 225 ntBASIC17.62■□□□□ 0.41
Nop56Q9D6Z1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Nop56Q9D6Z1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.62■□□□□ 0.41
Nop56Q9D6Z1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.62■□□□□ 0.41
Nop56Q9D6Z1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nop56Q9D6Z1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nop56Q9D6Z1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nop56Q9D6Z1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Nop56Q9D6Z1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nop56Q9D6Z1 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nop56Q9D6Z1 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.62■□□□□ 0.41
Nop56Q9D6Z1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Nop56Q9D6Z1 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nop56Q9D6Z1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nop56Q9D6Z1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nop56Q9D6Z1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nop56Q9D6Z1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nop56Q9D6Z1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nop56Q9D6Z1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nop56Q9D6Z1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Nop56Q9D6Z1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nop56Q9D6Z1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.61■□□□□ 0.41
Nop56Q9D6Z1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nop56Q9D6Z1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nop56Q9D6Z1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Nop56Q9D6Z1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nop56Q9D6Z1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nop56Q9D6Z1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nop56Q9D6Z1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nop56Q9D6Z1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nop56Q9D6Z1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.6■□□□□ 0.41
Nop56Q9D6Z1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Nop56Q9D6Z1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.6■□□□□ 0.41
Nop56Q9D6Z1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
Nop56Q9D6Z1 Gm10033-202ENSMUST00000211874 928 ntBASIC17.6■□□□□ 0.41
Nop56Q9D6Z1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nop56Q9D6Z1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nop56Q9D6Z1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nop56Q9D6Z1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Nop56Q9D6Z1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nop56Q9D6Z1 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.6■□□□□ 0.41
Nop56Q9D6Z1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nop56Q9D6Z1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nop56Q9D6Z1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nop56Q9D6Z1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Nop56Q9D6Z1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nop56Q9D6Z1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nop56Q9D6Z1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nop56Q9D6Z1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nop56Q9D6Z1 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nop56Q9D6Z1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nop56Q9D6Z1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Nop56Q9D6Z1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.59■□□□□ 0.41
Nop56Q9D6Z1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nop56Q9D6Z1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.59■□□□□ 0.41
Nop56Q9D6Z1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nop56Q9D6Z1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nop56Q9D6Z1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Nop56Q9D6Z1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nop56Q9D6Z1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nop56Q9D6Z1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nop56Q9D6Z1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nop56Q9D6Z1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nop56Q9D6Z1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nop56Q9D6Z1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nop56Q9D6Z1 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Nop56Q9D6Z1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nop56Q9D6Z1 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nop56Q9D6Z1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nop56Q9D6Z1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Nop56Q9D6Z1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nop56Q9D6Z1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.58■□□□□ 0.4
Nop56Q9D6Z1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nop56Q9D6Z1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nop56Q9D6Z1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nop56Q9D6Z1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Nop56Q9D6Z1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nop56Q9D6Z1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nop56Q9D6Z1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nop56Q9D6Z1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nop56Q9D6Z1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Nop56Q9D6Z1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms