Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps33aQ9D2N9 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.14■□□□□ 0.49
Vps33aQ9D2N9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps33aQ9D2N9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Vps33aQ9D2N9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps33aQ9D2N9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vps33aQ9D2N9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps33aQ9D2N9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps33aQ9D2N9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vps33aQ9D2N9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps33aQ9D2N9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Vps33aQ9D2N9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.14■□□□□ 0.49
Vps33aQ9D2N9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Vps33aQ9D2N9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps33aQ9D2N9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vps33aQ9D2N9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps33aQ9D2N9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Vps33aQ9D2N9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps33aQ9D2N9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Vps33aQ9D2N9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Vps33aQ9D2N9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vps33aQ9D2N9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps33aQ9D2N9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Vps33aQ9D2N9 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.13■□□□□ 0.49
Vps33aQ9D2N9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vps33aQ9D2N9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Vps33aQ9D2N9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps33aQ9D2N9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Vps33aQ9D2N9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Vps33aQ9D2N9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Vps33aQ9D2N9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps33aQ9D2N9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Vps33aQ9D2N9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps33aQ9D2N9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vps33aQ9D2N9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps33aQ9D2N9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vps33aQ9D2N9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.12■□□□□ 0.49
Vps33aQ9D2N9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps33aQ9D2N9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps33aQ9D2N9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.12■□□□□ 0.49
Vps33aQ9D2N9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Vps33aQ9D2N9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps33aQ9D2N9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps33aQ9D2N9 Gm43173-201ENSMUST00000202246 593 ntBASIC18.12■□□□□ 0.49
Vps33aQ9D2N9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.12■□□□□ 0.49
Vps33aQ9D2N9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps33aQ9D2N9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vps33aQ9D2N9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Vps33aQ9D2N9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vps33aQ9D2N9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps33aQ9D2N9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps33aQ9D2N9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Vps33aQ9D2N9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps33aQ9D2N9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps33aQ9D2N9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Vps33aQ9D2N9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Vps33aQ9D2N9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps33aQ9D2N9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps33aQ9D2N9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vps33aQ9D2N9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Vps33aQ9D2N9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps33aQ9D2N9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps33aQ9D2N9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.11■□□□□ 0.49
Vps33aQ9D2N9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Vps33aQ9D2N9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vps33aQ9D2N9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.11■□□□□ 0.49
Vps33aQ9D2N9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps33aQ9D2N9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps33aQ9D2N9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps33aQ9D2N9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Vps33aQ9D2N9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps33aQ9D2N9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps33aQ9D2N9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps33aQ9D2N9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Vps33aQ9D2N9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps33aQ9D2N9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps33aQ9D2N9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Vps33aQ9D2N9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps33aQ9D2N9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps33aQ9D2N9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Vps33aQ9D2N9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vps33aQ9D2N9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps33aQ9D2N9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vps33aQ9D2N9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.1■□□□□ 0.49
Vps33aQ9D2N9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Vps33aQ9D2N9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Vps33aQ9D2N9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps33aQ9D2N9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps33aQ9D2N9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps33aQ9D2N9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps33aQ9D2N9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps33aQ9D2N9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps33aQ9D2N9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps33aQ9D2N9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Vps33aQ9D2N9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps33aQ9D2N9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps33aQ9D2N9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Vps33aQ9D2N9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps33aQ9D2N9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps33aQ9D2N9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms