Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Lysmd1Q9D0E3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lysmd1Q9D0E3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lysmd1Q9D0E3 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lysmd1Q9D0E3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Lysmd1Q9D0E3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lysmd1Q9D0E3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Lysmd1Q9D0E3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Lysmd1Q9D0E3 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Lysmd1Q9D0E3 Tgds-204ENSMUST00000228543 1594 ntBASIC18.26■□□□□ 0.51
Lysmd1Q9D0E3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Lysmd1Q9D0E3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Lysmd1Q9D0E3 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.26■□□□□ 0.51
Lysmd1Q9D0E3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lysmd1Q9D0E3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.26■□□□□ 0.51
Lysmd1Q9D0E3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC18.26■□□□□ 0.51
Lysmd1Q9D0E3 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.26■□□□□ 0.51
Lysmd1Q9D0E3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.26■□□□□ 0.51
Lysmd1Q9D0E3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.26■□□□□ 0.51
Lysmd1Q9D0E3 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Lysmd1Q9D0E3 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.26■□□□□ 0.51
Lysmd1Q9D0E3 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC18.26■□□□□ 0.51
Lysmd1Q9D0E3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Lysmd1Q9D0E3 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.26■□□□□ 0.51
Lysmd1Q9D0E3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Lysmd1Q9D0E3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Lysmd1Q9D0E3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.25■□□□□ 0.51
Lysmd1Q9D0E3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd1Q9D0E3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd1Q9D0E3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd1Q9D0E3 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd1Q9D0E3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd1Q9D0E3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Lysmd1Q9D0E3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Lysmd1Q9D0E3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd1Q9D0E3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd1Q9D0E3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd1Q9D0E3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd1Q9D0E3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd1Q9D0E3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd1Q9D0E3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lysmd1Q9D0E3 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lysmd1Q9D0E3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lysmd1Q9D0E3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lysmd1Q9D0E3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Lysmd1Q9D0E3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lysmd1Q9D0E3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lysmd1Q9D0E3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lysmd1Q9D0E3 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Lysmd1Q9D0E3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lysmd1Q9D0E3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lysmd1Q9D0E3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Lysmd1Q9D0E3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Lysmd1Q9D0E3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lysmd1Q9D0E3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lysmd1Q9D0E3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lysmd1Q9D0E3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lysmd1Q9D0E3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lysmd1Q9D0E3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lysmd1Q9D0E3 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.23■□□□□ 0.51
Lysmd1Q9D0E3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lysmd1Q9D0E3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.23■□□□□ 0.51
Lysmd1Q9D0E3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Lysmd1Q9D0E3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lysmd1Q9D0E3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lysmd1Q9D0E3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lysmd1Q9D0E3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lysmd1Q9D0E3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Lysmd1Q9D0E3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lysmd1Q9D0E3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.22■□□□□ 0.51
Lysmd1Q9D0E3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lysmd1Q9D0E3 Gm5312-201ENSMUST00000203728 547 ntBASIC18.22■□□□□ 0.51
Lysmd1Q9D0E3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lysmd1Q9D0E3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Lysmd1Q9D0E3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lysmd1Q9D0E3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lysmd1Q9D0E3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lysmd1Q9D0E3 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Lysmd1Q9D0E3 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lysmd1Q9D0E3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lysmd1Q9D0E3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lysmd1Q9D0E3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Lysmd1Q9D0E3 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC18.22■□□□□ 0.51
Lysmd1Q9D0E3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lysmd1Q9D0E3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lysmd1Q9D0E3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Lysmd1Q9D0E3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Lysmd1Q9D0E3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lysmd1Q9D0E3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lysmd1Q9D0E3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lysmd1Q9D0E3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lysmd1Q9D0E3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lysmd1Q9D0E3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lysmd1Q9D0E3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lysmd1Q9D0E3 H2-Pa-201ENSMUST00000182803 626 ntBASIC18.21■□□□□ 0.51
Lysmd1Q9D0E3 Gm29707-201ENSMUST00000196325 491 ntBASIC18.21■□□□□ 0.51
Lysmd1Q9D0E3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lysmd1Q9D0E3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Lysmd1Q9D0E3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lysmd1Q9D0E3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms