Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx47Q9CWX9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.59■□□□□ 0.41
Ddx47Q9CWX9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx47Q9CWX9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx47Q9CWX9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ddx47Q9CWX9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx47Q9CWX9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.59■□□□□ 0.41
Ddx47Q9CWX9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ddx47Q9CWX9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ddx47Q9CWX9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ddx47Q9CWX9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx47Q9CWX9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx47Q9CWX9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ddx47Q9CWX9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx47Q9CWX9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx47Q9CWX9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx47Q9CWX9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx47Q9CWX9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx47Q9CWX9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.58■□□□□ 0.41
Ddx47Q9CWX9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx47Q9CWX9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx47Q9CWX9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx47Q9CWX9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx47Q9CWX9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx47Q9CWX9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.58■□□□□ 0.4
Ddx47Q9CWX9 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.58■□□□□ 0.4
Ddx47Q9CWX9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx47Q9CWX9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx47Q9CWX9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx47Q9CWX9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Ddx47Q9CWX9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ddx47Q9CWX9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx47Q9CWX9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx47Q9CWX9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx47Q9CWX9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ddx47Q9CWX9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx47Q9CWX9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx47Q9CWX9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx47Q9CWX9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx47Q9CWX9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ddx47Q9CWX9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.57■□□□□ 0.4
Ddx47Q9CWX9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx47Q9CWX9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx47Q9CWX9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx47Q9CWX9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx47Q9CWX9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.57■□□□□ 0.4
Ddx47Q9CWX9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx47Q9CWX9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx47Q9CWX9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx47Q9CWX9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx47Q9CWX9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx47Q9CWX9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ddx47Q9CWX9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx47Q9CWX9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Ddx47Q9CWX9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx47Q9CWX9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx47Q9CWX9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
Ddx47Q9CWX9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.56■□□□□ 0.4
Ddx47Q9CWX9 Mir2861-201ENSMUST00000175539 82 ntBASIC17.56■□□□□ 0.4
Ddx47Q9CWX9 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.56■□□□□ 0.4
Ddx47Q9CWX9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx47Q9CWX9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ddx47Q9CWX9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Ddx47Q9CWX9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ddx47Q9CWX9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx47Q9CWX9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx47Q9CWX9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ddx47Q9CWX9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ddx47Q9CWX9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ddx47Q9CWX9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx47Q9CWX9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ddx47Q9CWX9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx47Q9CWX9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx47Q9CWX9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx47Q9CWX9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx47Q9CWX9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Ddx47Q9CWX9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx47Q9CWX9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx47Q9CWX9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx47Q9CWX9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ddx47Q9CWX9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx47Q9CWX9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ddx47Q9CWX9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx47Q9CWX9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx47Q9CWX9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx47Q9CWX9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx47Q9CWX9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ddx47Q9CWX9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Ddx47Q9CWX9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ddx47Q9CWX9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ddx47Q9CWX9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx47Q9CWX9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx47Q9CWX9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Ddx47Q9CWX9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx47Q9CWX9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx47Q9CWX9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ddx47Q9CWX9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.54■□□□□ 0.4
Ddx47Q9CWX9 Gm42778-201ENSMUST00000199644 553 ntBASIC17.54■□□□□ 0.4
Ddx47Q9CWX9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.54■□□□□ 0.4
Ddx47Q9CWX9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms