Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Khdc3Q9CWU5 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Khdc3Q9CWU5 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.37■□□□□ 0.21
Khdc3Q9CWU5 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.37■□□□□ 0.21
Khdc3Q9CWU5 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.37■□□□□ 0.21
Khdc3Q9CWU5 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Khdc3Q9CWU5 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Khdc3Q9CWU5 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Khdc3Q9CWU5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Khdc3Q9CWU5 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Khdc3Q9CWU5 Mir1199-201ENSMUST00000117015 119 ntBASIC16.37■□□□□ 0.21
Khdc3Q9CWU5 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Khdc3Q9CWU5 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.37■□□□□ 0.21
Khdc3Q9CWU5 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Khdc3Q9CWU5 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Khdc3Q9CWU5 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Khdc3Q9CWU5 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Khdc3Q9CWU5 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.37■□□□□ 0.21
Khdc3Q9CWU5 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Khdc3Q9CWU5 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Khdc3Q9CWU5 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Khdc3Q9CWU5 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Khdc3Q9CWU5 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Khdc3Q9CWU5 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Khdc3Q9CWU5 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Khdc3Q9CWU5 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Khdc3Q9CWU5 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Khdc3Q9CWU5 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Khdc3Q9CWU5 Gm24841-201ENSMUST00000158676 357 ntBASIC16.36■□□□□ 0.21
Khdc3Q9CWU5 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Khdc3Q9CWU5 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.36■□□□□ 0.21
Khdc3Q9CWU5 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.36■□□□□ 0.21
Khdc3Q9CWU5 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Khdc3Q9CWU5 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.36■□□□□ 0.21
Khdc3Q9CWU5 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Khdc3Q9CWU5 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Khdc3Q9CWU5 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Khdc3Q9CWU5 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Khdc3Q9CWU5 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.36■□□□□ 0.21
Khdc3Q9CWU5 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.36■□□□□ 0.21
Khdc3Q9CWU5 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.36■□□□□ 0.21
Khdc3Q9CWU5 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Khdc3Q9CWU5 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Khdc3Q9CWU5 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.35■□□□□ 0.21
Khdc3Q9CWU5 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc3Q9CWU5 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc3Q9CWU5 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc3Q9CWU5 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc3Q9CWU5 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc3Q9CWU5 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc3Q9CWU5 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc3Q9CWU5 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.34■□□□□ 0.21
Khdc3Q9CWU5 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc3Q9CWU5 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.34■□□□□ 0.21
Khdc3Q9CWU5 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.34■□□□□ 0.21
Khdc3Q9CWU5 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.34■□□□□ 0.21
Khdc3Q9CWU5 Gm10812-201ENSMUST00000099864 546 ntBASIC16.34■□□□□ 0.21
Khdc3Q9CWU5 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc3Q9CWU5 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc3Q9CWU5 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc3Q9CWU5 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc3Q9CWU5 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc3Q9CWU5 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc3Q9CWU5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc3Q9CWU5 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc3Q9CWU5 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Khdc3Q9CWU5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Khdc3Q9CWU5 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.33■□□□□ 0.21
Khdc3Q9CWU5 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms