Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf8Q99PV0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf8Q99PV0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.92□□□□□ -0.18
Prpf8Q99PV0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.92□□□□□ -0.18
Prpf8Q99PV0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.92□□□□□ -0.18
Prpf8Q99PV0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf8Q99PV0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC13.92□□□□□ -0.18
Prpf8Q99PV0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.92□□□□□ -0.18
Prpf8Q99PV0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Prpf8Q99PV0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf8Q99PV0 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.92□□□□□ -0.18
Prpf8Q99PV0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf8Q99PV0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf8Q99PV0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf8Q99PV0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf8Q99PV0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Prpf8Q99PV0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf8Q99PV0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf8Q99PV0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf8Q99PV0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf8Q99PV0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf8Q99PV0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf8Q99PV0 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Gm26039-201ENSMUST00000158152 144 ntBASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf8Q99PV0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf8Q99PV0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf8Q99PV0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf8Q99PV0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf8Q99PV0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf8Q99PV0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf8Q99PV0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf8Q99PV0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf8Q99PV0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf8Q99PV0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf8Q99PV0 Olfr129-201ENSMUST00000122318 993 ntBASIC13.9□□□□□ -0.18
Prpf8Q99PV0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf8Q99PV0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf8Q99PV0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf8Q99PV0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf8Q99PV0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf8Q99PV0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf8Q99PV0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Prpf8Q99PV0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf8Q99PV0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf8Q99PV0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Prpf8Q99PV0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.9□□□□□ -0.18
Prpf8Q99PV0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms