Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm37292-201ENSMUST00000192062 758 ntBASIC16.68■□□□□ 0.26
Trim16Q99PP9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.68■□□□□ 0.26
Trim16Q99PP9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim16Q99PP9 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.68■□□□□ 0.26
Trim16Q99PP9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.68■□□□□ 0.26
Trim16Q99PP9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim16Q99PP9 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim16Q99PP9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.68■□□□□ 0.26
Trim16Q99PP9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim16Q99PP9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim16Q99PP9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim16Q99PP9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim16Q99PP9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim16Q99PP9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim16Q99PP9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim16Q99PP9 Idnk-204ENSMUST00000226010 1898 ntBASIC16.67■□□□□ 0.26
Trim16Q99PP9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim16Q99PP9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim16Q99PP9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim16Q99PP9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim16Q99PP9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim16Q99PP9 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.67■□□□□ 0.26
Trim16Q99PP9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim16Q99PP9 Gm11643-201ENSMUST00000119578 864 ntBASIC16.67■□□□□ 0.26
Trim16Q99PP9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim16Q99PP9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim16Q99PP9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim16Q99PP9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim16Q99PP9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim16Q99PP9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim16Q99PP9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim16Q99PP9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim16Q99PP9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim16Q99PP9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim16Q99PP9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim16Q99PP9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim16Q99PP9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim16Q99PP9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim16Q99PP9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trim16Q99PP9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim16Q99PP9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.66■□□□□ 0.26
Trim16Q99PP9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim16Q99PP9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim16Q99PP9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim16Q99PP9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim16Q99PP9 Gm43183-201ENSMUST00000200632 547 ntBASIC16.66■□□□□ 0.26
Trim16Q99PP9 Gm29791-202ENSMUST00000207888 369 ntBASIC16.66■□□□□ 0.26
Trim16Q99PP9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim16Q99PP9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim16Q99PP9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim16Q99PP9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Trim16Q99PP9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim16Q99PP9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.66■□□□□ 0.26
Trim16Q99PP9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim16Q99PP9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim16Q99PP9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim16Q99PP9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.66■□□□□ 0.26
Trim16Q99PP9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim16Q99PP9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim16Q99PP9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Trim16Q99PP9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim16Q99PP9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim16Q99PP9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim16Q99PP9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim16Q99PP9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim16Q99PP9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Trim16Q99PP9 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim16Q99PP9 Gm10418-201ENSMUST00000100943 576 ntBASIC16.65■□□□□ 0.26
Trim16Q99PP9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim16Q99PP9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim16Q99PP9 Gm10812-201ENSMUST00000099864 546 ntBASIC16.65■□□□□ 0.26
Trim16Q99PP9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim16Q99PP9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim16Q99PP9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim16Q99PP9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim16Q99PP9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim16Q99PP9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Trim16Q99PP9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim16Q99PP9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trim16Q99PP9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim16Q99PP9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim16Q99PP9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim16Q99PP9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim16Q99PP9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim16Q99PP9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim16Q99PP9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim16Q99PP9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim16Q99PP9 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim16Q99PP9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim16Q99PP9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim16Q99PP9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trim16Q99PP9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim16Q99PP9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trim16Q99PP9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim16Q99PP9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim16Q99PP9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim16Q99PP9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim16Q99PP9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.64■□□□□ 0.25
Trim16Q99PP9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim16Q99PP9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms