Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Trim34aQ99PP6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Trim34aQ99PP6 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC21.02■□□□□ 0.96
Trim34aQ99PP6 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
Trim34aQ99PP6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim34aQ99PP6 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim34aQ99PP6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC21.02■□□□□ 0.96
Trim34aQ99PP6 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Trim34aQ99PP6 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC21.02■□□□□ 0.96
Trim34aQ99PP6 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim34aQ99PP6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim34aQ99PP6 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Trim34aQ99PP6 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim34aQ99PP6 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim34aQ99PP6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Trim34aQ99PP6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim34aQ99PP6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trim34aQ99PP6 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trim34aQ99PP6 Iqck-206ENSMUST00000208658 2891 ntBASIC21.02■□□□□ 0.95
Trim34aQ99PP6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Trim34aQ99PP6 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trim34aQ99PP6 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trim34aQ99PP6 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim34aQ99PP6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim34aQ99PP6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim34aQ99PP6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim34aQ99PP6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim34aQ99PP6 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC21.01■□□□□ 0.95
Trim34aQ99PP6 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim34aQ99PP6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim34aQ99PP6 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
Trim34aQ99PP6 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Trim34aQ99PP6 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim34aQ99PP6 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim34aQ99PP6 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim34aQ99PP6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim34aQ99PP6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Trim34aQ99PP6 Phf7-203ENSMUST00000226565 1971 ntBASIC21.01■□□□□ 0.95
Trim34aQ99PP6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim34aQ99PP6 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim34aQ99PP6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim34aQ99PP6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim34aQ99PP6 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim34aQ99PP6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC21■□□□□ 0.95
Trim34aQ99PP6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
Trim34aQ99PP6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
Trim34aQ99PP6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
Trim34aQ99PP6 Gm34391-201ENSMUST00000203706 907 ntBASIC21■□□□□ 0.95
Trim34aQ99PP6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC21■□□□□ 0.95
Trim34aQ99PP6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Trim34aQ99PP6 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim34aQ99PP6 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim34aQ99PP6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim34aQ99PP6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim34aQ99PP6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim34aQ99PP6 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim34aQ99PP6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Trim34aQ99PP6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim34aQ99PP6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim34aQ99PP6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim34aQ99PP6 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim34aQ99PP6 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC20.99■□□□□ 0.95
Trim34aQ99PP6 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC20.99■□□□□ 0.95
Trim34aQ99PP6 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim34aQ99PP6 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim34aQ99PP6 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim34aQ99PP6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim34aQ99PP6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim34aQ99PP6 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim34aQ99PP6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim34aQ99PP6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim34aQ99PP6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim34aQ99PP6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim34aQ99PP6 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim34aQ99PP6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim34aQ99PP6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim34aQ99PP6 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim34aQ99PP6 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim34aQ99PP6 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim34aQ99PP6 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.98■□□□□ 0.95
Trim34aQ99PP6 Birc2-201ENSMUST00000054878 378 ntBASIC20.98■□□□□ 0.95
Trim34aQ99PP6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Trim34aQ99PP6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim34aQ99PP6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim34aQ99PP6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim34aQ99PP6 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.98■□□□□ 0.95
Trim34aQ99PP6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim34aQ99PP6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim34aQ99PP6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Trim34aQ99PP6 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim34aQ99PP6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim34aQ99PP6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC20.97■□□□□ 0.95
Trim34aQ99PP6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.97■□□□□ 0.95
Trim34aQ99PP6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim34aQ99PP6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC20.97■□□□□ 0.95
Trim34aQ99PP6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.97■□□□□ 0.95
Trim34aQ99PP6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC20.97■□□□□ 0.95
Trim34aQ99PP6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim34aQ99PP6 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.97■□□□□ 0.95
Trim34aQ99PP6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms