Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Rtn4rQ99PI8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rtn4rQ99PI8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.05■□□□□ -0
Rtn4rQ99PI8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.05■□□□□ -0
Rtn4rQ99PI8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rtn4rQ99PI8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Rtn4rQ99PI8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.05■□□□□ -0
Rtn4rQ99PI8 Gm9731-201ENSMUST00000209480 747 ntBASIC15.05■□□□□ -0
Rtn4rQ99PI8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rtn4rQ99PI8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.05■□□□□ -0
Rtn4rQ99PI8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rtn4rQ99PI8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rtn4rQ99PI8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rtn4rQ99PI8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.05■□□□□ -0
Rtn4rQ99PI8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rtn4rQ99PI8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rtn4rQ99PI8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Rtn4rQ99PI8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn4rQ99PI8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn4rQ99PI8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn4rQ99PI8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rtn4rQ99PI8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn4rQ99PI8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rtn4rQ99PI8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn4rQ99PI8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.04■□□□□ -0
Rtn4rQ99PI8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn4rQ99PI8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn4rQ99PI8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rtn4rQ99PI8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn4rQ99PI8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn4rQ99PI8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Rtn4rQ99PI8 Gm17661-201ENSMUST00000170317 270 ntBASIC15.04■□□□□ -0
Rtn4rQ99PI8 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.04■□□□□ -0
Rtn4rQ99PI8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rtn4rQ99PI8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn4rQ99PI8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn4rQ99PI8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rtn4rQ99PI8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rtn4rQ99PI8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn4rQ99PI8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn4rQ99PI8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn4rQ99PI8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn4rQ99PI8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn4rQ99PI8 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.03■□□□□ -0
Rtn4rQ99PI8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rtn4rQ99PI8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.03■□□□□ -0
Rtn4rQ99PI8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.03■□□□□ -0
Rtn4rQ99PI8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.03■□□□□ -0
Rtn4rQ99PI8 Gm8969-201ENSMUST00000199694 526 ntBASIC15.03■□□□□ -0
Rtn4rQ99PI8 Il3ra-202ENSMUST00000223589 738 ntBASIC15.03■□□□□ -0
Rtn4rQ99PI8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn4rQ99PI8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn4rQ99PI8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn4rQ99PI8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn4rQ99PI8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Rtn4rQ99PI8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn4rQ99PI8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rtn4rQ99PI8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn4rQ99PI8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rtn4rQ99PI8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Rtn4rQ99PI8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rtn4rQ99PI8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rtn4rQ99PI8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Rtn4rQ99PI8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rtn4rQ99PI8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rtn4rQ99PI8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Rtn4rQ99PI8 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.02■□□□□ -0
Rtn4rQ99PI8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rtn4rQ99PI8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rtn4rQ99PI8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.02■□□□□ -0
Rtn4rQ99PI8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rtn4rQ99PI8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rtn4rQ99PI8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Rtn4rQ99PI8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Rtn4rQ99PI8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Rtn4rQ99PI8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rtn4rQ99PI8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rtn4rQ99PI8 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.02■□□□□ -0
Rtn4rQ99PI8 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.02■□□□□ -0
Rtn4rQ99PI8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rtn4rQ99PI8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rtn4rQ99PI8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rtn4rQ99PI8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rtn4rQ99PI8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rtn4rQ99PI8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.02□□□□□ -0.01
Rtn4rQ99PI8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rtn4rQ99PI8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.02□□□□□ -0.01
Rtn4rQ99PI8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rtn4rQ99PI8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rtn4rQ99PI8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rtn4rQ99PI8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rtn4rQ99PI8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rtn4rQ99PI8 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.01□□□□□ -0.01
Rtn4rQ99PI8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Rtn4rQ99PI8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rtn4rQ99PI8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rtn4rQ99PI8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rtn4rQ99PI8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rtn4rQ99PI8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rtn4rQ99PI8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms