Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rtn4Q99P72 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Rtn4Q99P72 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.67■■□□□ 1.06
Rtn4Q99P72 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rtn4Q99P72 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rtn4Q99P72 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rtn4Q99P72 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Rtn4Q99P72 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rtn4Q99P72 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rtn4Q99P72 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC21.67■■□□□ 1.06
Rtn4Q99P72 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Rtn4Q99P72 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Rtn4Q99P72 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rtn4Q99P72 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Rtn4Q99P72 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Rtn4Q99P72 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn4Q99P72 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn4Q99P72 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn4Q99P72 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn4Q99P72 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn4Q99P72 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Rtn4Q99P72 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn4Q99P72 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn4Q99P72 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn4Q99P72 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
Rtn4Q99P72 Mir5130-201ENSMUST00000175160 84 ntBASIC21.66■■□□□ 1.06
Rtn4Q99P72 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn4Q99P72 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC21.66■■□□□ 1.06
Rtn4Q99P72 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.66■■□□□ 1.06
Rtn4Q99P72 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC21.66■■□□□ 1.06
Rtn4Q99P72 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn4Q99P72 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn4Q99P72 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC21.66■■□□□ 1.06
Rtn4Q99P72 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn4Q99P72 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn4Q99P72 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn4Q99P72 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Rtn4Q99P72 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn4Q99P72 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC21.66■■□□□ 1.06
Rtn4Q99P72 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn4Q99P72 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn4Q99P72 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn4Q99P72 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Rtn4Q99P72 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn4Q99P72 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn4Q99P72 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtn4Q99P72 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rtn4Q99P72 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtn4Q99P72 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC21.65■■□□□ 1.06
Rtn4Q99P72 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Rtn4Q99P72 Gm45925-201ENSMUST00000218882 744 ntBASIC21.65■■□□□ 1.06
Rtn4Q99P72 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtn4Q99P72 Gm7367-201ENSMUST00000057611 492 ntBASIC21.65■■□□□ 1.06
Rtn4Q99P72 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtn4Q99P72 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Rtn4Q99P72 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtn4Q99P72 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Rtn4Q99P72 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtn4Q99P72 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.65■■□□□ 1.06
Rtn4Q99P72 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rtn4Q99P72 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.64■■□□□ 1.06
Rtn4Q99P72 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.64■■□□□ 1.06
Rtn4Q99P72 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.06
Rtn4Q99P72 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rtn4Q99P72 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rtn4Q99P72 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Rtn4Q99P72 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Rtn4Q99P72 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC21.64■■□□□ 1.05
Rtn4Q99P72 Gm6659-201ENSMUST00000174752 547 ntBASIC21.64■■□□□ 1.05
Rtn4Q99P72 Gm2274-201ENSMUST00000184539 609 ntBASIC21.64■■□□□ 1.05
Rtn4Q99P72 Gm29791-202ENSMUST00000207888 369 ntBASIC21.64■■□□□ 1.05
Rtn4Q99P72 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rtn4Q99P72 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Rtn4Q99P72 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Rtn4Q99P72 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rtn4Q99P72 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rtn4Q99P72 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rtn4Q99P72 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rtn4Q99P72 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rtn4Q99P72 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rtn4Q99P72 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rtn4Q99P72 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rtn4Q99P72 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Rtn4Q99P72 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtn4Q99P72 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtn4Q99P72 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC21.63■■□□□ 1.05
Rtn4Q99P72 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtn4Q99P72 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtn4Q99P72 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtn4Q99P72 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtn4Q99P72 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtn4Q99P72 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtn4Q99P72 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtn4Q99P72 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC21.63■■□□□ 1.05
Rtn4Q99P72 Gm4217-201ENSMUST00000182243 1002 ntBASIC21.63■■□□□ 1.05
Rtn4Q99P72 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC21.63■■□□□ 1.05
Rtn4Q99P72 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtn4Q99P72 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtn4Q99P72 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.63■■□□□ 1.05
Rtn4Q99P72 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms