Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Col25a1Q99MQ5 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col25a1Q99MQ5 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col25a1Q99MQ5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col25a1Q99MQ5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Col25a1Q99MQ5 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.66■□□□□ 0.42
Col25a1Q99MQ5 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col25a1Q99MQ5 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.66■□□□□ 0.42
Col25a1Q99MQ5 Gm12644-201ENSMUST00000119935 606 ntBASIC17.66■□□□□ 0.42
Col25a1Q99MQ5 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Col25a1Q99MQ5 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col25a1Q99MQ5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col25a1Q99MQ5 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col25a1Q99MQ5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col25a1Q99MQ5 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col25a1Q99MQ5 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col25a1Q99MQ5 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Col25a1Q99MQ5 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col25a1Q99MQ5 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Col25a1Q99MQ5 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col25a1Q99MQ5 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col25a1Q99MQ5 Gm15372-201ENSMUST00000120729 834 ntBASIC17.65■□□□□ 0.42
Col25a1Q99MQ5 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col25a1Q99MQ5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col25a1Q99MQ5 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col25a1Q99MQ5 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col25a1Q99MQ5 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col25a1Q99MQ5 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
Col25a1Q99MQ5 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.65■□□□□ 0.42
Col25a1Q99MQ5 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col25a1Q99MQ5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col25a1Q99MQ5 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col25a1Q99MQ5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.65■□□□□ 0.42
Col25a1Q99MQ5 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Col25a1Q99MQ5 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Col25a1Q99MQ5 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col25a1Q99MQ5 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Col25a1Q99MQ5 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Col25a1Q99MQ5 Mir5126-201ENSMUST00000175513 77 ntBASIC17.64■□□□□ 0.41
Col25a1Q99MQ5 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col25a1Q99MQ5 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col25a1Q99MQ5 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col25a1Q99MQ5 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col25a1Q99MQ5 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col25a1Q99MQ5 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.64■□□□□ 0.41
Col25a1Q99MQ5 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col25a1Q99MQ5 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.63■□□□□ 0.41
Col25a1Q99MQ5 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col25a1Q99MQ5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col25a1Q99MQ5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col25a1Q99MQ5 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col25a1Q99MQ5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.63■□□□□ 0.41
Col25a1Q99MQ5 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col25a1Q99MQ5 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col25a1Q99MQ5 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col25a1Q99MQ5 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.63■□□□□ 0.41
Col25a1Q99MQ5 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col25a1Q99MQ5 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.63■□□□□ 0.41
Col25a1Q99MQ5 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col25a1Q99MQ5 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col25a1Q99MQ5 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col25a1Q99MQ5 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col25a1Q99MQ5 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col25a1Q99MQ5 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col25a1Q99MQ5 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col25a1Q99MQ5 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col25a1Q99MQ5 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col25a1Q99MQ5 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col25a1Q99MQ5 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col25a1Q99MQ5 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col25a1Q99MQ5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col25a1Q99MQ5 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.63■□□□□ 0.41
Col25a1Q99MQ5 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col25a1Q99MQ5 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col25a1Q99MQ5 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col25a1Q99MQ5 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col25a1Q99MQ5 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col25a1Q99MQ5 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col25a1Q99MQ5 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Col25a1Q99MQ5 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.62■□□□□ 0.41
Col25a1Q99MQ5 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col25a1Q99MQ5 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col25a1Q99MQ5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.62■□□□□ 0.41
Col25a1Q99MQ5 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col25a1Q99MQ5 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col25a1Q99MQ5 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col25a1Q99MQ5 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col25a1Q99MQ5 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Col25a1Q99MQ5 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.61■□□□□ 0.41
Col25a1Q99MQ5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col25a1Q99MQ5 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col25a1Q99MQ5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col25a1Q99MQ5 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col25a1Q99MQ5 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.61■□□□□ 0.41
Col25a1Q99MQ5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col25a1Q99MQ5 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col25a1Q99MQ5 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col25a1Q99MQ5 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.61■□□□□ 0.41
Col25a1Q99MQ5 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.61■□□□□ 0.41
Col25a1Q99MQ5 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms