Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr3Q99MB1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr3Q99MB1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr3Q99MB1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr3Q99MB1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Tlr3Q99MB1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr3Q99MB1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.31■□□□□ 0.52
Tlr3Q99MB1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr3Q99MB1 Gm21814-202ENSMUST00000203277 873 ntBASIC18.31■□□□□ 0.52
Tlr3Q99MB1 Gm3375-201ENSMUST00000203929 796 ntBASIC18.31■□□□□ 0.52
Tlr3Q99MB1 Gm30025-201ENSMUST00000218555 728 ntBASIC18.31■□□□□ 0.52
Tlr3Q99MB1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr3Q99MB1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr3Q99MB1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr3Q99MB1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr3Q99MB1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Tlr3Q99MB1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr3Q99MB1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.31■□□□□ 0.52
Tlr3Q99MB1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr3Q99MB1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr3Q99MB1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.31■□□□□ 0.52
Tlr3Q99MB1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Tlr3Q99MB1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tlr3Q99MB1 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.3■□□□□ 0.52
Tlr3Q99MB1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tlr3Q99MB1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tlr3Q99MB1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tlr3Q99MB1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tlr3Q99MB1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Tlr3Q99MB1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Tlr3Q99MB1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.3■□□□□ 0.52
Tlr3Q99MB1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tlr3Q99MB1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tlr3Q99MB1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.3■□□□□ 0.52
Tlr3Q99MB1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tlr3Q99MB1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tlr3Q99MB1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Tlr3Q99MB1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tlr3Q99MB1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tlr3Q99MB1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.3■□□□□ 0.52
Tlr3Q99MB1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tlr3Q99MB1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tlr3Q99MB1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Tlr3Q99MB1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Tlr3Q99MB1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tlr3Q99MB1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tlr3Q99MB1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tlr3Q99MB1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tlr3Q99MB1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tlr3Q99MB1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tlr3Q99MB1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tlr3Q99MB1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tlr3Q99MB1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tlr3Q99MB1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tlr3Q99MB1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Tlr3Q99MB1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tlr3Q99MB1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tlr3Q99MB1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Tlr3Q99MB1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Tlr3Q99MB1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Tlr3Q99MB1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tlr3Q99MB1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tlr3Q99MB1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tlr3Q99MB1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tlr3Q99MB1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tlr3Q99MB1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr3Q99MB1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr3Q99MB1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr3Q99MB1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr3Q99MB1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Tlr3Q99MB1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr3Q99MB1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Tlr3Q99MB1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr3Q99MB1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr3Q99MB1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr3Q99MB1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Tlr3Q99MB1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.28■□□□□ 0.52
Tlr3Q99MB1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.28■□□□□ 0.52
Tlr3Q99MB1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr3Q99MB1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr3Q99MB1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Tlr3Q99MB1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr3Q99MB1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr3Q99MB1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr3Q99MB1 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr3Q99MB1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Tlr3Q99MB1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr3Q99MB1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tlr3Q99MB1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.27■□□□□ 0.52
Tlr3Q99MB1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tlr3Q99MB1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tlr3Q99MB1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tlr3Q99MB1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Tlr3Q99MB1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tlr3Q99MB1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tlr3Q99MB1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tlr3Q99MB1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.27■□□□□ 0.52
Tlr3Q99MB1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tlr3Q99MB1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tlr3Q99MB1 Il3ra-202ENSMUST00000223589 738 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms