Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.94■□□□□ 0.14
Nkx6-1Q99MA9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx6-1Q99MA9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx6-1Q99MA9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Nkx6-1Q99MA9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Nkx6-1Q99MA9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx6-1Q99MA9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Nkx6-1Q99MA9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx6-1Q99MA9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx6-1Q99MA9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx6-1Q99MA9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx6-1Q99MA9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Nkx6-1Q99MA9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx6-1Q99MA9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx6-1Q99MA9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx6-1Q99MA9 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.93■□□□□ 0.14
Nkx6-1Q99MA9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx6-1Q99MA9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx6-1Q99MA9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx6-1Q99MA9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.93■□□□□ 0.14
Nkx6-1Q99MA9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx6-1Q99MA9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx6-1Q99MA9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx6-1Q99MA9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.93■□□□□ 0.14
Nkx6-1Q99MA9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx6-1Q99MA9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx6-1Q99MA9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx6-1Q99MA9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx6-1Q99MA9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx6-1Q99MA9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx6-1Q99MA9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Nkx6-1Q99MA9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx6-1Q99MA9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx6-1Q99MA9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx6-1Q99MA9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Nkx6-1Q99MA9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Nkx6-1Q99MA9 Gm12644-201ENSMUST00000119935 606 ntBASIC15.92■□□□□ 0.14
Nkx6-1Q99MA9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.92■□□□□ 0.14
Nkx6-1Q99MA9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx6-1Q99MA9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.92■□□□□ 0.14
Nkx6-1Q99MA9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx6-1Q99MA9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Nkx6-1Q99MA9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Nkx6-1Q99MA9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Nkx6-1Q99MA9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Nkx6-1Q99MA9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Nkx6-1Q99MA9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.92■□□□□ 0.14
Nkx6-1Q99MA9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx6-1Q99MA9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Nkx6-1Q99MA9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx6-1Q99MA9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Nkx6-1Q99MA9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.91■□□□□ 0.14
Nkx6-1Q99MA9 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.91■□□□□ 0.14
Nkx6-1Q99MA9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.91■□□□□ 0.14
Nkx6-1Q99MA9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx6-1Q99MA9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx6-1Q99MA9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx6-1Q99MA9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Nkx6-1Q99MA9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx6-1Q99MA9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx6-1Q99MA9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx6-1Q99MA9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx6-1Q99MA9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Nkx6-1Q99MA9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx6-1Q99MA9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx6-1Q99MA9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx6-1Q99MA9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx6-1Q99MA9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx6-1Q99MA9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx6-1Q99MA9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx6-1Q99MA9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx6-1Q99MA9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx6-1Q99MA9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms