Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clcc1Q99LI2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clcc1Q99LI2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clcc1Q99LI2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Clcc1Q99LI2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clcc1Q99LI2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clcc1Q99LI2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Clcc1Q99LI2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Clcc1Q99LI2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clcc1Q99LI2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clcc1Q99LI2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clcc1Q99LI2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clcc1Q99LI2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
Clcc1Q99LI2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.86■□□□□ 0.29
Clcc1Q99LI2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clcc1Q99LI2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.86■□□□□ 0.29
Clcc1Q99LI2 Gm33142-201ENSMUST00000193913 867 ntBASIC16.86■□□□□ 0.29
Clcc1Q99LI2 Gm7213-201ENSMUST00000215977 950 ntBASIC16.86■□□□□ 0.29
Clcc1Q99LI2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clcc1Q99LI2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clcc1Q99LI2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clcc1Q99LI2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clcc1Q99LI2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clcc1Q99LI2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clcc1Q99LI2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clcc1Q99LI2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcc1Q99LI2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcc1Q99LI2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.85■□□□□ 0.29
Clcc1Q99LI2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcc1Q99LI2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Clcc1Q99LI2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.85■□□□□ 0.29
Clcc1Q99LI2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.85■□□□□ 0.29
Clcc1Q99LI2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Clcc1Q99LI2 Gm27389-201ENSMUST00000183622 195 ntBASIC16.85■□□□□ 0.29
Clcc1Q99LI2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.85■□□□□ 0.29
Clcc1Q99LI2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Clcc1Q99LI2 Gm21559-201ENSMUST00000220638 855 ntBASIC16.85■□□□□ 0.29
Clcc1Q99LI2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Clcc1Q99LI2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
Clcc1Q99LI2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Clcc1Q99LI2 Gm8587-201ENSMUST00000076538 843 ntBASIC16.85■□□□□ 0.29
Clcc1Q99LI2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcc1Q99LI2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcc1Q99LI2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcc1Q99LI2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcc1Q99LI2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcc1Q99LI2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcc1Q99LI2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcc1Q99LI2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcc1Q99LI2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcc1Q99LI2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcc1Q99LI2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcc1Q99LI2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Clcc1Q99LI2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Clcc1Q99LI2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcc1Q99LI2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Clcc1Q99LI2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Clcc1Q99LI2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcc1Q99LI2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Clcc1Q99LI2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcc1Q99LI2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Clcc1Q99LI2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Clcc1Q99LI2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Clcc1Q99LI2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcc1Q99LI2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.83■□□□□ 0.28
Clcc1Q99LI2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Clcc1Q99LI2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.83■□□□□ 0.28
Clcc1Q99LI2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.83■□□□□ 0.28
Clcc1Q99LI2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Clcc1Q99LI2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcc1Q99LI2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcc1Q99LI2 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.83■□□□□ 0.28
Clcc1Q99LI2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcc1Q99LI2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Clcc1Q99LI2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcc1Q99LI2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcc1Q99LI2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcc1Q99LI2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcc1Q99LI2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcc1Q99LI2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.82■□□□□ 0.28
Clcc1Q99LI2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Clcc1Q99LI2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcc1Q99LI2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcc1Q99LI2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Clcc1Q99LI2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Clcc1Q99LI2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcc1Q99LI2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcc1Q99LI2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcc1Q99LI2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Clcc1Q99LI2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clcc1Q99LI2 Gm17661-201ENSMUST00000170317 270 ntBASIC16.82■□□□□ 0.28
Clcc1Q99LI2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcc1Q99LI2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Clcc1Q99LI2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcc1Q99LI2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcc1Q99LI2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Clcc1Q99LI2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcc1Q99LI2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcc1Q99LI2 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.82■□□□□ 0.28
Clcc1Q99LI2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms