Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Thumpd1Q99J36 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Thumpd1Q99J36 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Thumpd1Q99J36 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.23■□□□□ 0.03
Thumpd1Q99J36 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Thumpd1Q99J36 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Thumpd1Q99J36 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Thumpd1Q99J36 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Thumpd1Q99J36 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Thumpd1Q99J36 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Thumpd1Q99J36 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Thumpd1Q99J36 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Thumpd1Q99J36 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Thumpd1Q99J36 AV356131-201ENSMUST00000206201 750 ntBASIC15.22■□□□□ 0.03
Thumpd1Q99J36 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.22■□□□□ 0.03
Thumpd1Q99J36 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Thumpd1Q99J36 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.22■□□□□ 0.03
Thumpd1Q99J36 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Thumpd1Q99J36 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Thumpd1Q99J36 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Thumpd1Q99J36 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Thumpd1Q99J36 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Thumpd1Q99J36 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Thumpd1Q99J36 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Thumpd1Q99J36 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd1Q99J36 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd1Q99J36 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Thumpd1Q99J36 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd1Q99J36 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd1Q99J36 Gm11927-201ENSMUST00000118472 759 ntBASIC15.21■□□□□ 0.03
Thumpd1Q99J36 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd1Q99J36 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.21■□□□□ 0.03
Thumpd1Q99J36 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd1Q99J36 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd1Q99J36 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd1Q99J36 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Thumpd1Q99J36 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd1Q99J36 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd1Q99J36 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Thumpd1Q99J36 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd1Q99J36 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd1Q99J36 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd1Q99J36 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd1Q99J36 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Thumpd1Q99J36 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd1Q99J36 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd1Q99J36 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd1Q99J36 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd1Q99J36 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd1Q99J36 Gm42642-201ENSMUST00000200683 355 ntBASIC15.2■□□□□ 0.02
Thumpd1Q99J36 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd1Q99J36 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Thumpd1Q99J36 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd1Q99J36 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Thumpd1Q99J36 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd1Q99J36 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd1Q99J36 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Thumpd1Q99J36 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd1Q99J36 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.2■□□□□ 0.02
Thumpd1Q99J36 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd1Q99J36 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd1Q99J36 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd1Q99J36 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd1Q99J36 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd1Q99J36 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd1Q99J36 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd1Q99J36 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Thumpd1Q99J36 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd1Q99J36 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Thumpd1Q99J36 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd1Q99J36 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd1Q99J36 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd1Q99J36 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Thumpd1Q99J36 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.19■□□□□ 0.02
Thumpd1Q99J36 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Thumpd1Q99J36 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd1Q99J36 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd1Q99J36 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd1Q99J36 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd1Q99J36 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd1Q99J36 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.19■□□□□ 0.02
Thumpd1Q99J36 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd1Q99J36 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd1Q99J36 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd1Q99J36 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd1Q99J36 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd1Q99J36 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd1Q99J36 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd1Q99J36 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd1Q99J36 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd1Q99J36 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd1Q99J36 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
Thumpd1Q99J36 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.18■□□□□ 0.02
Thumpd1Q99J36 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.18■□□□□ 0.02
Thumpd1Q99J36 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd1Q99J36 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd1Q99J36 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd1Q99J36 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd1Q99J36 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd1Q99J36 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms