Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smc1bQ920F6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smc1bQ920F6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smc1bQ920F6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc1bQ920F6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smc1bQ920F6 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc1bQ920F6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc1bQ920F6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.63■□□□□ 0.73
Smc1bQ920F6 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc1bQ920F6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.63■□□□□ 0.73
Smc1bQ920F6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Smc1bQ920F6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc1bQ920F6 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Smc1bQ920F6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc1bQ920F6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc1bQ920F6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.63■□□□□ 0.73
Smc1bQ920F6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
Smc1bQ920F6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.63■□□□□ 0.73
Smc1bQ920F6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.63■□□□□ 0.73
Smc1bQ920F6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.63■□□□□ 0.73
Smc1bQ920F6 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc1bQ920F6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc1bQ920F6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc1bQ920F6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc1bQ920F6 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc1bQ920F6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc1bQ920F6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smc1bQ920F6 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc1bQ920F6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc1bQ920F6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc1bQ920F6 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Smc1bQ920F6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.62■□□□□ 0.73
Smc1bQ920F6 Gm4974-201ENSMUST00000209974 875 ntBASIC19.62■□□□□ 0.73
Smc1bQ920F6 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc1bQ920F6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc1bQ920F6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc1bQ920F6 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc1bQ920F6 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc1bQ920F6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc1bQ920F6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.62■□□□□ 0.73
Smc1bQ920F6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Smc1bQ920F6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc1bQ920F6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc1bQ920F6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc1bQ920F6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc1bQ920F6 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc1bQ920F6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.61■□□□□ 0.73
Smc1bQ920F6 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.61■□□□□ 0.73
Smc1bQ920F6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Smc1bQ920F6 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc1bQ920F6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc1bQ920F6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc1bQ920F6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc1bQ920F6 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc1bQ920F6 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc1bQ920F6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Smc1bQ920F6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smc1bQ920F6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc1bQ920F6 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Smc1bQ920F6 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.6■□□□□ 0.73
Smc1bQ920F6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc1bQ920F6 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc1bQ920F6 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Smc1bQ920F6 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc1bQ920F6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smc1bQ920F6 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.6■□□□□ 0.73
Smc1bQ920F6 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc1bQ920F6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc1bQ920F6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc1bQ920F6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc1bQ920F6 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Smc1bQ920F6 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Smc1bQ920F6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc1bQ920F6 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc1bQ920F6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc1bQ920F6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc1bQ920F6 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smc1bQ920F6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Smc1bQ920F6 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc1bQ920F6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc1bQ920F6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc1bQ920F6 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.59■□□□□ 0.73
Smc1bQ920F6 Gm17808-201ENSMUST00000200859 894 ntBASIC19.59■□□□□ 0.73
Smc1bQ920F6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.59■□□□□ 0.73
Smc1bQ920F6 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc1bQ920F6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc1bQ920F6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smc1bQ920F6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc1bQ920F6 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc1bQ920F6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.59■□□□□ 0.73
Smc1bQ920F6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc1bQ920F6 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
Smc1bQ920F6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.58■□□□□ 0.73
Smc1bQ920F6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Smc1bQ920F6 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smc1bQ920F6 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smc1bQ920F6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smc1bQ920F6 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Smc1bQ920F6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Smc1bQ920F6 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms