Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha11Q91Y19 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Pcdha11Q91Y19 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha11Q91Y19 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha11Q91Y19 Gm10013-201ENSMUST00000106074 672 ntBASIC17.93■□□□□ 0.46
Pcdha11Q91Y19 Gm22697-201ENSMUST00000175194 63 ntBASIC17.93■□□□□ 0.46
Pcdha11Q91Y19 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdha11Q91Y19 Gm18032-201ENSMUST00000222541 538 ntBASIC17.93■□□□□ 0.46
Pcdha11Q91Y19 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Pcdha11Q91Y19 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha11Q91Y19 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha11Q91Y19 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdha11Q91Y19 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha11Q91Y19 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha11Q91Y19 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Pcdha11Q91Y19 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha11Q91Y19 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha11Q91Y19 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha11Q91Y19 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha11Q91Y19 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha11Q91Y19 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha11Q91Y19 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha11Q91Y19 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.92■□□□□ 0.46
Pcdha11Q91Y19 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha11Q91Y19 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha11Q91Y19 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Pcdha11Q91Y19 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha11Q91Y19 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha11Q91Y19 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Pcdha11Q91Y19 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Pcdha11Q91Y19 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha11Q91Y19 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha11Q91Y19 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha11Q91Y19 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha11Q91Y19 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha11Q91Y19 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha11Q91Y19 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha11Q91Y19 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha11Q91Y19 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha11Q91Y19 Gm7213-201ENSMUST00000215977 950 ntBASIC17.91■□□□□ 0.46
Pcdha11Q91Y19 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha11Q91Y19 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Pcdha11Q91Y19 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Pcdha11Q91Y19 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha11Q91Y19 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha11Q91Y19 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha11Q91Y19 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha11Q91Y19 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha11Q91Y19 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha11Q91Y19 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Pcdha11Q91Y19 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha11Q91Y19 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha11Q91Y19 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Pcdha11Q91Y19 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha11Q91Y19 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha11Q91Y19 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha11Q91Y19 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha11Q91Y19 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha11Q91Y19 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha11Q91Y19 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.9■□□□□ 0.46
Pcdha11Q91Y19 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha11Q91Y19 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha11Q91Y19 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Pcdha11Q91Y19 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha11Q91Y19 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.9■□□□□ 0.46
Pcdha11Q91Y19 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha11Q91Y19 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.9■□□□□ 0.46
Pcdha11Q91Y19 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha11Q91Y19 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdha11Q91Y19 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Pcdha11Q91Y19 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdha11Q91Y19 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.89■□□□□ 0.45
Pcdha11Q91Y19 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha11Q91Y19 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha11Q91Y19 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha11Q91Y19 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha11Q91Y19 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.89■□□□□ 0.45
Pcdha11Q91Y19 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha11Q91Y19 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha11Q91Y19 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha11Q91Y19 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha11Q91Y19 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha11Q91Y19 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha11Q91Y19 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha11Q91Y19 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha11Q91Y19 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha11Q91Y19 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha11Q91Y19 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha11Q91Y19 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Pcdha11Q91Y19 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Pcdha11Q91Y19 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Pcdha11Q91Y19 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha11Q91Y19 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha11Q91Y19 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.88■□□□□ 0.45
Pcdha11Q91Y19 Mir1668-201ENSMUST00000184114 107 ntBASIC17.88■□□□□ 0.45
Pcdha11Q91Y19 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Pcdha11Q91Y19 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha11Q91Y19 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Pcdha11Q91Y19 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Pcdha11Q91Y19 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms