Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdha3Q91Y16 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha3Q91Y16 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha3Q91Y16 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha3Q91Y16 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.84■□□□□ 0.45
Pcdha3Q91Y16 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.84■□□□□ 0.45
Pcdha3Q91Y16 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Pcdha3Q91Y16 Gm27463-201ENSMUST00000183569 57 ntBASIC17.84■□□□□ 0.45
Pcdha3Q91Y16 Mir7071-201ENSMUST00000184847 69 ntBASIC17.84■□□□□ 0.45
Pcdha3Q91Y16 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.84■□□□□ 0.45
Pcdha3Q91Y16 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Pcdha3Q91Y16 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha3Q91Y16 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha3Q91Y16 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Pcdha3Q91Y16 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha3Q91Y16 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Pcdha3Q91Y16 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdha3Q91Y16 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.83■□□□□ 0.45
Pcdha3Q91Y16 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Pcdha3Q91Y16 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdha3Q91Y16 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdha3Q91Y16 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha3Q91Y16 Gm15565-201ENSMUST00000118890 427 ntBASIC17.83■□□□□ 0.44
Pcdha3Q91Y16 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Pcdha3Q91Y16 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha3Q91Y16 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha3Q91Y16 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.83■□□□□ 0.44
Pcdha3Q91Y16 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha3Q91Y16 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha3Q91Y16 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Pcdha3Q91Y16 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha3Q91Y16 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Pcdha3Q91Y16 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Pcdha3Q91Y16 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha3Q91Y16 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha3Q91Y16 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha3Q91Y16 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha3Q91Y16 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha3Q91Y16 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha3Q91Y16 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha3Q91Y16 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha3Q91Y16 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha3Q91Y16 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Pcdha3Q91Y16 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.82■□□□□ 0.44
Pcdha3Q91Y16 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Pcdha3Q91Y16 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha3Q91Y16 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha3Q91Y16 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha3Q91Y16 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha3Q91Y16 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pcdha3Q91Y16 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha3Q91Y16 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha3Q91Y16 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha3Q91Y16 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha3Q91Y16 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha3Q91Y16 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha3Q91Y16 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Pcdha3Q91Y16 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.81■□□□□ 0.44
Pcdha3Q91Y16 Gm37025-201ENSMUST00000195159 829 ntBASIC17.81■□□□□ 0.44
Pcdha3Q91Y16 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha3Q91Y16 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha3Q91Y16 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha3Q91Y16 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdha3Q91Y16 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha3Q91Y16 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha3Q91Y16 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha3Q91Y16 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.81■□□□□ 0.44
Pcdha3Q91Y16 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha3Q91Y16 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha3Q91Y16 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdha3Q91Y16 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha3Q91Y16 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha3Q91Y16 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pcdha3Q91Y16 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.8■□□□□ 0.44
Pcdha3Q91Y16 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdha3Q91Y16 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.8■□□□□ 0.44
Pcdha3Q91Y16 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.8■□□□□ 0.44
Pcdha3Q91Y16 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha3Q91Y16 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdha3Q91Y16 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.8■□□□□ 0.44
Pcdha3Q91Y16 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdha3Q91Y16 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.8■□□□□ 0.44
Pcdha3Q91Y16 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha3Q91Y16 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha3Q91Y16 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha3Q91Y16 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha3Q91Y16 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Pcdha3Q91Y16 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdha3Q91Y16 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.79■□□□□ 0.44
Pcdha3Q91Y16 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pcdha3Q91Y16 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha3Q91Y16 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha3Q91Y16 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha3Q91Y16 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha3Q91Y16 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha3Q91Y16 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdha3Q91Y16 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdha3Q91Y16 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdha3Q91Y16 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha3Q91Y16 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms