Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdha8Q91Y12 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdha8Q91Y12 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha8Q91Y12 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha8Q91Y12 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha8Q91Y12 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha8Q91Y12 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdha8Q91Y12 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha8Q91Y12 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdha8Q91Y12 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdha8Q91Y12 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha8Q91Y12 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdha8Q91Y12 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha8Q91Y12 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha8Q91Y12 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha8Q91Y12 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdha8Q91Y12 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha8Q91Y12 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha8Q91Y12 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha8Q91Y12 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha8Q91Y12 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdha8Q91Y12 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Pcdha8Q91Y12 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha8Q91Y12 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha8Q91Y12 Gm24841-201ENSMUST00000158676 357 ntBASIC16.6■□□□□ 0.25
Pcdha8Q91Y12 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdha8Q91Y12 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdha8Q91Y12 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.6■□□□□ 0.25
Pcdha8Q91Y12 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.6■□□□□ 0.25
Pcdha8Q91Y12 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha8Q91Y12 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha8Q91Y12 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha8Q91Y12 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha8Q91Y12 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Pcdha8Q91Y12 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha8Q91Y12 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha8Q91Y12 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.59■□□□□ 0.25
Pcdha8Q91Y12 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha8Q91Y12 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdha8Q91Y12 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdha8Q91Y12 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha8Q91Y12 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha8Q91Y12 Mir1199-201ENSMUST00000117015 119 ntBASIC16.59■□□□□ 0.25
Pcdha8Q91Y12 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha8Q91Y12 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdha8Q91Y12 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha8Q91Y12 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdha8Q91Y12 Gm10812-201ENSMUST00000099864 546 ntBASIC16.59■□□□□ 0.25
Pcdha8Q91Y12 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha8Q91Y12 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha8Q91Y12 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha8Q91Y12 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha8Q91Y12 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdha8Q91Y12 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdha8Q91Y12 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha8Q91Y12 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha8Q91Y12 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha8Q91Y12 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha8Q91Y12 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha8Q91Y12 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.58■□□□□ 0.24
Pcdha8Q91Y12 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdha8Q91Y12 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.58■□□□□ 0.24
Pcdha8Q91Y12 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha8Q91Y12 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha8Q91Y12 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha8Q91Y12 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha8Q91Y12 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha8Q91Y12 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha8Q91Y12 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha8Q91Y12 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha8Q91Y12 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Pcdha8Q91Y12 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 Haglr-201ENSMUST00000100000 2085 ntBASIC16.57■□□□□ 0.24
Pcdha8Q91Y12 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdha8Q91Y12 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms