Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb1Q91Y08 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb1Q91Y08 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb1Q91Y08 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb1Q91Y08 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pcdhb1Q91Y08 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb1Q91Y08 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb1Q91Y08 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb1Q91Y08 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb1Q91Y08 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb1Q91Y08 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb1Q91Y08 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb1Q91Y08 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb1Q91Y08 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb1Q91Y08 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb1Q91Y08 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.72■□□□□ 0.43
Pcdhb1Q91Y08 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb1Q91Y08 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb1Q91Y08 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb1Q91Y08 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb1Q91Y08 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb1Q91Y08 Gm21814-202ENSMUST00000203277 873 ntBASIC17.72■□□□□ 0.43
Pcdhb1Q91Y08 Gm3375-201ENSMUST00000203929 796 ntBASIC17.72■□□□□ 0.43
Pcdhb1Q91Y08 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb1Q91Y08 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.72■□□□□ 0.43
Pcdhb1Q91Y08 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pcdhb1Q91Y08 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhb1Q91Y08 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhb1Q91Y08 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb1Q91Y08 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb1Q91Y08 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb1Q91Y08 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb1Q91Y08 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb1Q91Y08 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb1Q91Y08 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb1Q91Y08 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Pcdhb1Q91Y08 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb1Q91Y08 Mir5122-201ENSMUST00000175004 89 ntBASIC17.71■□□□□ 0.43
Pcdhb1Q91Y08 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb1Q91Y08 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.71■□□□□ 0.43
Pcdhb1Q91Y08 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb1Q91Y08 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb1Q91Y08 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Pcdhb1Q91Y08 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb1Q91Y08 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb1Q91Y08 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb1Q91Y08 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb1Q91Y08 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb1Q91Y08 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb1Q91Y08 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhb1Q91Y08 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhb1Q91Y08 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.7■□□□□ 0.42
Pcdhb1Q91Y08 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb1Q91Y08 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb1Q91Y08 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb1Q91Y08 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb1Q91Y08 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhb1Q91Y08 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
Pcdhb1Q91Y08 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb1Q91Y08 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb1Q91Y08 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb1Q91Y08 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb1Q91Y08 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.7■□□□□ 0.42
Pcdhb1Q91Y08 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.7■□□□□ 0.42
Pcdhb1Q91Y08 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb1Q91Y08 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb1Q91Y08 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhb1Q91Y08 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb1Q91Y08 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhb1Q91Y08 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhb1Q91Y08 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb1Q91Y08 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb1Q91Y08 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb1Q91Y08 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb1Q91Y08 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb1Q91Y08 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb1Q91Y08 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb1Q91Y08 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb1Q91Y08 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb1Q91Y08 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb1Q91Y08 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb1Q91Y08 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb1Q91Y08 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb1Q91Y08 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Pcdhb1Q91Y08 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
Pcdhb1Q91Y08 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb1Q91Y08 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Pcdhb1Q91Y08 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb1Q91Y08 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb1Q91Y08 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb1Q91Y08 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb1Q91Y08 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb1Q91Y08 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb1Q91Y08 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb1Q91Y08 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb1Q91Y08 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms