Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb5Q91XZ5 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb5Q91XZ5 Gm15794-201ENSMUST00000120182 631 ntBASIC20.1■□□□□ 0.81
Pcdhb5Q91XZ5 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb5Q91XZ5 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb5Q91XZ5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb5Q91XZ5 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb5Q91XZ5 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Pcdhb5Q91XZ5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb5Q91XZ5 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb5Q91XZ5 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb5Q91XZ5 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb5Q91XZ5 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb5Q91XZ5 Phf7-203ENSMUST00000226565 1971 ntBASIC20.09■□□□□ 0.81
Pcdhb5Q91XZ5 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb5Q91XZ5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.09■□□□□ 0.81
Pcdhb5Q91XZ5 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Pcdhb5Q91XZ5 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb5Q91XZ5 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb5Q91XZ5 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb5Q91XZ5 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb5Q91XZ5 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb5Q91XZ5 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb5Q91XZ5 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb5Q91XZ5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb5Q91XZ5 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Pcdhb5Q91XZ5 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC20.08■□□□□ 0.81
Pcdhb5Q91XZ5 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC20.08■□□□□ 0.81
Pcdhb5Q91XZ5 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.08■□□□□ 0.81
Pcdhb5Q91XZ5 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb5Q91XZ5 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.08■□□□□ 0.81
Pcdhb5Q91XZ5 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb5Q91XZ5 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb5Q91XZ5 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb5Q91XZ5 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb5Q91XZ5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb5Q91XZ5 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb5Q91XZ5 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb5Q91XZ5 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.08■□□□□ 0.8
Pcdhb5Q91XZ5 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb5Q91XZ5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb5Q91XZ5 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Gm18115-201ENSMUST00000221209 621 ntBASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb5Q91XZ5 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb5Q91XZ5 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Pcdhb5Q91XZ5 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb5Q91XZ5 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb5Q91XZ5 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb5Q91XZ5 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb5Q91XZ5 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb5Q91XZ5 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Pcdhb5Q91XZ5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb5Q91XZ5 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb5Q91XZ5 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb5Q91XZ5 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb5Q91XZ5 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pcdhb5Q91XZ5 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb5Q91XZ5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Pcdhb5Q91XZ5 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb5Q91XZ5 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Pcdhb5Q91XZ5 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb5Q91XZ5 Gm24589-201ENSMUST00000116692 94 ntBASIC20.05■□□□□ 0.8
Pcdhb5Q91XZ5 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdhb5Q91XZ5 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.05■□□□□ 0.8
Pcdhb5Q91XZ5 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdhb5Q91XZ5 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb5Q91XZ5 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb5Q91XZ5 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb5Q91XZ5 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb5Q91XZ5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb5Q91XZ5 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb5Q91XZ5 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb5Q91XZ5 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb5Q91XZ5 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms