Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhgb1Q91XX8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgb1Q91XX8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Pcdhgb1Q91XX8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgb1Q91XX8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Pcdhgb1Q91XX8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
Pcdhgb1Q91XX8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhgb1Q91XX8 Gm6345-202ENSMUST00000180900 204 ntBASIC17.73■□□□□ 0.43
Pcdhgb1Q91XX8 Gm21362-201ENSMUST00000194272 928 ntBASIC17.73■□□□□ 0.43
Pcdhgb1Q91XX8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
Pcdhgb1Q91XX8 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgb1Q91XX8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgb1Q91XX8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgb1Q91XX8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgb1Q91XX8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgb1Q91XX8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgb1Q91XX8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgb1Q91XX8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.72■□□□□ 0.43
Pcdhgb1Q91XX8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb1Q91XX8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb1Q91XX8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb1Q91XX8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb1Q91XX8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb1Q91XX8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb1Q91XX8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.72■□□□□ 0.43
Pcdhgb1Q91XX8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.72■□□□□ 0.43
Pcdhgb1Q91XX8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb1Q91XX8 Gm7213-201ENSMUST00000215977 950 ntBASIC17.72■□□□□ 0.43
Pcdhgb1Q91XX8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb1Q91XX8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhgb1Q91XX8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.72■□□□□ 0.43
Pcdhgb1Q91XX8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb1Q91XX8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb1Q91XX8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb1Q91XX8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb1Q91XX8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgb1Q91XX8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Pcdhgb1Q91XX8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgb1Q91XX8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Pcdhgb1Q91XX8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgb1Q91XX8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgb1Q91XX8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgb1Q91XX8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgb1Q91XX8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgb1Q91XX8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgb1Q91XX8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgb1Q91XX8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgb1Q91XX8 Gm7367-201ENSMUST00000057611 492 ntBASIC17.71■□□□□ 0.43
Pcdhgb1Q91XX8 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Pcdhgb1Q91XX8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgb1Q91XX8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgb1Q91XX8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhgb1Q91XX8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhgb1Q91XX8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgb1Q91XX8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhgb1Q91XX8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.7■□□□□ 0.42
Pcdhgb1Q91XX8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgb1Q91XX8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdhgb1Q91XX8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgb1Q91XX8 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pcdhgb1Q91XX8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgb1Q91XX8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgb1Q91XX8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgb1Q91XX8 Gm10819-201ENSMUST00000099988 561 ntBASIC17.7■□□□□ 0.42
Pcdhgb1Q91XX8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgb1Q91XX8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgb1Q91XX8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.7■□□□□ 0.42
Pcdhgb1Q91XX8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgb1Q91XX8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgb1Q91XX8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Gm21559-201ENSMUST00000220638 855 ntBASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Gm8587-201ENSMUST00000076538 843 ntBASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Gm10566-201ENSMUST00000086739 996 ntBASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb1Q91XX8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms