Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3d19Q91X43 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3d19Q91X43 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3d19Q91X43 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3d19Q91X43 Gm9013-201ENSMUST00000132939 882 ntBASIC17.76■□□□□ 0.43
Sh3d19Q91X43 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3d19Q91X43 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3d19Q91X43 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.76■□□□□ 0.43
Sh3d19Q91X43 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3d19Q91X43 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3d19Q91X43 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3d19Q91X43 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3d19Q91X43 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3d19Q91X43 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3d19Q91X43 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3d19Q91X43 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3d19Q91X43 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3d19Q91X43 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3d19Q91X43 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Sh3d19Q91X43 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.75■□□□□ 0.43
Sh3d19Q91X43 Gm11355-201ENSMUST00000121120 306 ntBASIC17.75■□□□□ 0.43
Sh3d19Q91X43 Gm25016-201ENSMUST00000158399 131 ntBASIC17.75■□□□□ 0.43
Sh3d19Q91X43 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3d19Q91X43 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3d19Q91X43 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.75■□□□□ 0.43
Sh3d19Q91X43 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3d19Q91X43 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3d19Q91X43 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3d19Q91X43 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Sh3d19Q91X43 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Sh3d19Q91X43 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3d19Q91X43 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3d19Q91X43 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Sh3d19Q91X43 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3d19Q91X43 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3d19Q91X43 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3d19Q91X43 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Sh3d19Q91X43 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3d19Q91X43 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Sh3d19Q91X43 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Sh3d19Q91X43 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Sh3d19Q91X43 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3d19Q91X43 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3d19Q91X43 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3d19Q91X43 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.74■□□□□ 0.43
Sh3d19Q91X43 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3d19Q91X43 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Sh3d19Q91X43 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.74■□□□□ 0.43
Sh3d19Q91X43 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Sh3d19Q91X43 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3d19Q91X43 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3d19Q91X43 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Sh3d19Q91X43 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3d19Q91X43 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.73■□□□□ 0.43
Sh3d19Q91X43 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3d19Q91X43 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3d19Q91X43 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3d19Q91X43 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3d19Q91X43 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3d19Q91X43 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.73■□□□□ 0.43
Sh3d19Q91X43 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3d19Q91X43 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3d19Q91X43 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.73■□□□□ 0.43
Sh3d19Q91X43 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Sh3d19Q91X43 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3d19Q91X43 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3d19Q91X43 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3d19Q91X43 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3d19Q91X43 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.73■□□□□ 0.43
Sh3d19Q91X43 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3d19Q91X43 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3d19Q91X43 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3d19Q91X43 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3d19Q91X43 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3d19Q91X43 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3d19Q91X43 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3d19Q91X43 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3d19Q91X43 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3d19Q91X43 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3d19Q91X43 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3d19Q91X43 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3d19Q91X43 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3d19Q91X43 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3d19Q91X43 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.72■□□□□ 0.43
Sh3d19Q91X43 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3d19Q91X43 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3d19Q91X43 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3d19Q91X43 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3d19Q91X43 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.72■□□□□ 0.43
Sh3d19Q91X43 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3d19Q91X43 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3d19Q91X43 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3d19Q91X43 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3d19Q91X43 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3d19Q91X43 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3d19Q91X43 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3d19Q91X43 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3d19Q91X43 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3d19Q91X43 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3d19Q91X43 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms