Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Usb1Q91W78 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Usb1Q91W78 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usb1Q91W78 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.85■□□□□ 0.29
Usb1Q91W78 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usb1Q91W78 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.85■□□□□ 0.29
Usb1Q91W78 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Usb1Q91W78 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Usb1Q91W78 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Usb1Q91W78 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Usb1Q91W78 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usb1Q91W78 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usb1Q91W78 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Usb1Q91W78 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Usb1Q91W78 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usb1Q91W78 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usb1Q91W78 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usb1Q91W78 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usb1Q91W78 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usb1Q91W78 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usb1Q91W78 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usb1Q91W78 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.84■□□□□ 0.29
Usb1Q91W78 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.84■□□□□ 0.29
Usb1Q91W78 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usb1Q91W78 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usb1Q91W78 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usb1Q91W78 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usb1Q91W78 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usb1Q91W78 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usb1Q91W78 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usb1Q91W78 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Usb1Q91W78 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.84■□□□□ 0.29
Usb1Q91W78 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usb1Q91W78 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.84■□□□□ 0.29
Usb1Q91W78 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usb1Q91W78 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Usb1Q91W78 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Usb1Q91W78 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usb1Q91W78 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usb1Q91W78 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usb1Q91W78 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.83■□□□□ 0.28
Usb1Q91W78 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usb1Q91W78 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usb1Q91W78 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usb1Q91W78 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usb1Q91W78 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usb1Q91W78 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.82■□□□□ 0.28
Usb1Q91W78 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usb1Q91W78 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usb1Q91W78 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usb1Q91W78 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.82■□□□□ 0.28
Usb1Q91W78 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Usb1Q91W78 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usb1Q91W78 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usb1Q91W78 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usb1Q91W78 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usb1Q91W78 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usb1Q91W78 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.82■□□□□ 0.28
Usb1Q91W78 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usb1Q91W78 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.82■□□□□ 0.28
Usb1Q91W78 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usb1Q91W78 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usb1Q91W78 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usb1Q91W78 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usb1Q91W78 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usb1Q91W78 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usb1Q91W78 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usb1Q91W78 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Usb1Q91W78 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usb1Q91W78 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Usb1Q91W78 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Usb1Q91W78 Gm3375-201ENSMUST00000203929 796 ntBASIC16.81■□□□□ 0.28
Usb1Q91W78 Gm30025-201ENSMUST00000218555 728 ntBASIC16.81■□□□□ 0.28
Usb1Q91W78 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usb1Q91W78 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usb1Q91W78 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usb1Q91W78 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usb1Q91W78 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.81■□□□□ 0.28
Usb1Q91W78 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usb1Q91W78 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usb1Q91W78 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usb1Q91W78 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usb1Q91W78 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Usb1Q91W78 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.81■□□□□ 0.28
Usb1Q91W78 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usb1Q91W78 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usb1Q91W78 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Usb1Q91W78 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.8■□□□□ 0.28
Usb1Q91W78 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.8■□□□□ 0.28
Usb1Q91W78 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Usb1Q91W78 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.8■□□□□ 0.28
Usb1Q91W78 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.8■□□□□ 0.28
Usb1Q91W78 Gm10517-202ENSMUST00000192970 758 ntBASIC16.8■□□□□ 0.28
Usb1Q91W78 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.8■□□□□ 0.28
Usb1Q91W78 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.8■□□□□ 0.28
Usb1Q91W78 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.8■□□□□ 0.28
Usb1Q91W78 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Usb1Q91W78 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Usb1Q91W78 Haglr-201ENSMUST00000100000 2085 ntBASIC16.8■□□□□ 0.28
Usb1Q91W78 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms