Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Vsx1Q91V10 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Vsx1Q91V10 Actl10-202ENSMUST00000226583 1501 ntBASIC16.86■□□□□ 0.29
Vsx1Q91V10 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vsx1Q91V10 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vsx1Q91V10 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vsx1Q91V10 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vsx1Q91V10 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vsx1Q91V10 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vsx1Q91V10 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.85■□□□□ 0.29
Vsx1Q91V10 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vsx1Q91V10 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.85■□□□□ 0.29
Vsx1Q91V10 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vsx1Q91V10 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Vsx1Q91V10 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.85■□□□□ 0.29
Vsx1Q91V10 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.85■□□□□ 0.29
Vsx1Q91V10 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vsx1Q91V10 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vsx1Q91V10 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Vsx1Q91V10 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vsx1Q91V10 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vsx1Q91V10 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vsx1Q91V10 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vsx1Q91V10 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Vsx1Q91V10 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vsx1Q91V10 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vsx1Q91V10 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.85■□□□□ 0.29
Vsx1Q91V10 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.85■□□□□ 0.29
Vsx1Q91V10 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vsx1Q91V10 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vsx1Q91V10 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vsx1Q91V10 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Vsx1Q91V10 Gm15794-201ENSMUST00000120182 631 ntBASIC16.84■□□□□ 0.29
Vsx1Q91V10 Gm11452-201ENSMUST00000122376 690 ntBASIC16.84■□□□□ 0.29
Vsx1Q91V10 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.84■□□□□ 0.29
Vsx1Q91V10 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.84■□□□□ 0.29
Vsx1Q91V10 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vsx1Q91V10 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vsx1Q91V10 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vsx1Q91V10 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vsx1Q91V10 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vsx1Q91V10 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.84■□□□□ 0.29
Vsx1Q91V10 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vsx1Q91V10 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vsx1Q91V10 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Vsx1Q91V10 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vsx1Q91V10 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vsx1Q91V10 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Vsx1Q91V10 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vsx1Q91V10 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vsx1Q91V10 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.84■□□□□ 0.29
Vsx1Q91V10 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Vsx1Q91V10 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.29
Vsx1Q91V10 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vsx1Q91V10 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vsx1Q91V10 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vsx1Q91V10 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vsx1Q91V10 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.83■□□□□ 0.28
Vsx1Q91V10 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Vsx1Q91V10 Gm37935-201ENSMUST00000192012 982 ntBASIC16.83■□□□□ 0.28
Vsx1Q91V10 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vsx1Q91V10 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vsx1Q91V10 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.83■□□□□ 0.28
Vsx1Q91V10 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.83■□□□□ 0.28
Vsx1Q91V10 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vsx1Q91V10 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vsx1Q91V10 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vsx1Q91V10 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vsx1Q91V10 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.82■□□□□ 0.28
Vsx1Q91V10 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vsx1Q91V10 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Vsx1Q91V10 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vsx1Q91V10 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vsx1Q91V10 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vsx1Q91V10 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.82■□□□□ 0.28
Vsx1Q91V10 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Vsx1Q91V10 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vsx1Q91V10 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Vsx1Q91V10 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vsx1Q91V10 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vsx1Q91V10 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.82■□□□□ 0.28
Vsx1Q91V10 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.82■□□□□ 0.28
Vsx1Q91V10 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vsx1Q91V10 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vsx1Q91V10 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vsx1Q91V10 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Vsx1Q91V10 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.81■□□□□ 0.28
Vsx1Q91V10 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vsx1Q91V10 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vsx1Q91V10 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vsx1Q91V10 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vsx1Q91V10 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vsx1Q91V10 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vsx1Q91V10 Gm10418-201ENSMUST00000100943 576 ntBASIC16.81■□□□□ 0.28
Vsx1Q91V10 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.81■□□□□ 0.28
Vsx1Q91V10 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vsx1Q91V10 Gm18733-201ENSMUST00000173950 856 ntBASIC16.81■□□□□ 0.28
Vsx1Q91V10 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Vsx1Q91V10 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vsx1Q91V10 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms