Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
H1fooQ8VIK3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
H1fooQ8VIK3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H1fooQ8VIK3 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H1fooQ8VIK3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H1fooQ8VIK3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H1fooQ8VIK3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
H1fooQ8VIK3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H1fooQ8VIK3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H1fooQ8VIK3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
H1fooQ8VIK3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H1fooQ8VIK3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H1fooQ8VIK3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.3□□□□□ -0.12
H1fooQ8VIK3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H1fooQ8VIK3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
H1fooQ8VIK3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H1fooQ8VIK3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.3□□□□□ -0.12
H1fooQ8VIK3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H1fooQ8VIK3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H1fooQ8VIK3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.3□□□□□ -0.12
H1fooQ8VIK3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.3□□□□□ -0.12
H1fooQ8VIK3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
H1fooQ8VIK3 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.3□□□□□ -0.12
H1fooQ8VIK3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
H1fooQ8VIK3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
H1fooQ8VIK3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H1fooQ8VIK3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.3□□□□□ -0.12
H1fooQ8VIK3 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.3□□□□□ -0.12
H1fooQ8VIK3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.3□□□□□ -0.12
H1fooQ8VIK3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.3□□□□□ -0.12
H1fooQ8VIK3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H1fooQ8VIK3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H1fooQ8VIK3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
H1fooQ8VIK3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
H1fooQ8VIK3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.29□□□□□ -0.12
H1fooQ8VIK3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H1fooQ8VIK3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H1fooQ8VIK3 Gm10653-202ENSMUST00000139570 835 ntBASIC14.29□□□□□ -0.12
H1fooQ8VIK3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.29□□□□□ -0.12
H1fooQ8VIK3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H1fooQ8VIK3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.29□□□□□ -0.12
H1fooQ8VIK3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H1fooQ8VIK3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H1fooQ8VIK3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H1fooQ8VIK3 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H1fooQ8VIK3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H1fooQ8VIK3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H1fooQ8VIK3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
H1fooQ8VIK3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H1fooQ8VIK3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
H1fooQ8VIK3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.29□□□□□ -0.12
H1fooQ8VIK3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H1fooQ8VIK3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H1fooQ8VIK3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
H1fooQ8VIK3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H1fooQ8VIK3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H1fooQ8VIK3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H1fooQ8VIK3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H1fooQ8VIK3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.28□□□□□ -0.12
H1fooQ8VIK3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H1fooQ8VIK3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H1fooQ8VIK3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H1fooQ8VIK3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H1fooQ8VIK3 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H1fooQ8VIK3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H1fooQ8VIK3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H1fooQ8VIK3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
H1fooQ8VIK3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H1fooQ8VIK3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H1fooQ8VIK3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
H1fooQ8VIK3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H1fooQ8VIK3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H1fooQ8VIK3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
H1fooQ8VIK3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.27□□□□□ -0.12
H1fooQ8VIK3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
H1fooQ8VIK3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.27□□□□□ -0.12
H1fooQ8VIK3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H1fooQ8VIK3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
H1fooQ8VIK3 Gm20760-201ENSMUST00000179197 648 ntBASIC14.27□□□□□ -0.13
H1fooQ8VIK3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
H1fooQ8VIK3 Gm10698-201ENSMUST00000182663 604 ntBASIC14.27□□□□□ -0.13
H1fooQ8VIK3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H1fooQ8VIK3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
H1fooQ8VIK3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
H1fooQ8VIK3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
H1fooQ8VIK3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
H1fooQ8VIK3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
H1fooQ8VIK3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H1fooQ8VIK3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
H1fooQ8VIK3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H1fooQ8VIK3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
H1fooQ8VIK3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
H1fooQ8VIK3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H1fooQ8VIK3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
H1fooQ8VIK3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
H1fooQ8VIK3 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H1fooQ8VIK3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H1fooQ8VIK3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H1fooQ8VIK3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H1fooQ8VIK3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms