Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Trim60Q8VI40 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim60Q8VI40 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim60Q8VI40 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim60Q8VI40 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim60Q8VI40 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim60Q8VI40 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim60Q8VI40 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim60Q8VI40 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Trim60Q8VI40 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim60Q8VI40 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim60Q8VI40 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim60Q8VI40 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.66■□□□□ 0.42
Trim60Q8VI40 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim60Q8VI40 Gm4974-201ENSMUST00000209974 875 ntBASIC17.66■□□□□ 0.42
Trim60Q8VI40 Gm18025-201ENSMUST00000221733 862 ntBASIC17.66■□□□□ 0.42
Trim60Q8VI40 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim60Q8VI40 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim60Q8VI40 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim60Q8VI40 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim60Q8VI40 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim60Q8VI40 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim60Q8VI40 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim60Q8VI40 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim60Q8VI40 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim60Q8VI40 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.65■□□□□ 0.42
Trim60Q8VI40 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim60Q8VI40 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim60Q8VI40 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.65■□□□□ 0.42
Trim60Q8VI40 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.65■□□□□ 0.42
Trim60Q8VI40 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.65■□□□□ 0.42
Trim60Q8VI40 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim60Q8VI40 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim60Q8VI40 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim60Q8VI40 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim60Q8VI40 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim60Q8VI40 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim60Q8VI40 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim60Q8VI40 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim60Q8VI40 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trim60Q8VI40 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Trim60Q8VI40 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim60Q8VI40 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Trim60Q8VI40 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim60Q8VI40 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim60Q8VI40 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim60Q8VI40 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim60Q8VI40 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim60Q8VI40 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim60Q8VI40 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trim60Q8VI40 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim60Q8VI40 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim60Q8VI40 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim60Q8VI40 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Trim60Q8VI40 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim60Q8VI40 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim60Q8VI40 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim60Q8VI40 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim60Q8VI40 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Trim60Q8VI40 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim60Q8VI40 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim60Q8VI40 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim60Q8VI40 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim60Q8VI40 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim60Q8VI40 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trim60Q8VI40 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim60Q8VI40 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim60Q8VI40 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim60Q8VI40 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim60Q8VI40 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim60Q8VI40 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Trim60Q8VI40 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim60Q8VI40 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim60Q8VI40 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim60Q8VI40 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim60Q8VI40 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim60Q8VI40 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim60Q8VI40 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim60Q8VI40 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim60Q8VI40 Gm12382-201ENSMUST00000122005 922 ntBASIC17.62■□□□□ 0.41
Trim60Q8VI40 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.62■□□□□ 0.41
Trim60Q8VI40 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim60Q8VI40 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim60Q8VI40 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim60Q8VI40 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Trim60Q8VI40 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trim60Q8VI40 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim60Q8VI40 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim60Q8VI40 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.61■□□□□ 0.41
Trim60Q8VI40 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim60Q8VI40 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim60Q8VI40 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim60Q8VI40 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim60Q8VI40 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim60Q8VI40 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim60Q8VI40 Gm42545-201ENSMUST00000202755 922 ntBASIC17.61■□□□□ 0.41
Trim60Q8VI40 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.61■□□□□ 0.41
Trim60Q8VI40 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim60Q8VI40 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.61■□□□□ 0.41
Trim60Q8VI40 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms